| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0988 |
|---|
| Symbol | |
|---|
| ID | 4081676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1014542 |
|---|
| End bp | 1015090 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638009348 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_616038 |
|---|
| Protein GI | 103486477 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.871261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCC CTGCTCCCGA CTCGCCCATC GAGACGCGCT GGGAAGGCCG CTTCGTCACG
GTCAAGCAGC AGGGAAACTG GGAATATGTC GCGCGCTCGC GCGGCATCCA CGCTGCGGTG
ATCCTGGCGA TCGACGAGGA TGCGCGCGGT CGCCACGCCA TCCTTGTCGA GCAATATCGC
GTGCCCTTGA AACGCCAATG CCTCGAACTG CCCGCGGGGC TGGTCGGCGA CGACAGCGCG
GGCGAAGCCG CCGAGGTCGC CGCGGCGCGC GAGCTGGAGG AGGAAACGGG TTATCGCGCC
GCGACCTGGC GCACCGTCGG CGAATTCTAC AGCTCGCCGG GCATGGTCAG CGAAAGTTTC
ACCCTGCTCG TTGCGACCGG GTTGACCAAG GTTGGCGCAG GCGGCGGCGT CGGTGGCGAG
GACATCGTCG TCCACCGCGT CCCGCTGAAC GGGATCGAGG ATTTCGTTGC GGCGAAGCGC
GCCGAAGGCT GCGGCATCGA CGTGCGCGTG GCGATGCTGC TGGCGGGTGG GCTGCTGGCC
GACACCTAA
|
|---|
| Protein sequence | MTRPAPDSPI ETRWEGRFVT VKQQGNWEYV ARSRGIHAAV ILAIDEDARG RHAILVEQYR
VPLKRQCLEL PAGLVGDDSA GEAAEVAAAR ELEEETGYRA ATWRTVGEFY SSPGMVSESF
TLLVATGLTK VGAGGGVGGE DIVVHRVPLN GIEDFVAAKR AEGCGIDVRV AMLLAGGLLA
DT
|
|---|
| |