| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0955 |
|---|
| Symbol | |
|---|
| ID | 4082454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 980275 |
|---|
| End bp | 981687 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638009316 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_616006 |
|---|
| Protein GI | 103486445 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.247316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGG GTGTGAAGGG CAGCCTGCTG GCTGCGGTGT CGCTGGCGCT TGTCGGCTGT
GCGGCGACGG GTGGCGGTGC GGCGTCGGCG GGCGACAAGC CAGCCGCGAG CGCCGACAAA
CCAGCGAAGT TCGACAAAAA CCCCTATCCG TCGACCTATA CGCCCTATCC GGGGCGGCCG
ACGGCGGTGC GCGGGGTGAC GATCTTTGAC GGCGAAGGCG GGCGGATCGA CAATGGCGTC
GTGCTGTTCG CCGGCGGCAA GATCGAGGCG GTCGGCGGCG CCGACACGGC GATCCCGGCG
GGCTATGATG TGATCGACGG CACCGGCAAG GTGCTGACCC CCGGCATCAT CGACATCCAC
AGCCACCTTG GCGACTATCC CTCGCCCAGC GTCGATGCGC ACGACGACGG CAACGAGGCG
ACGTCGCCGA CCACACCCGA AGTCTGGTCC GAACATAGCG TGTGGCCACA GGATCCGGGG
TTCAGCCGCG CGCTGGCGAA TGGCGGCGTC ACGAGCCTGC AAATCCTGCC CGGCAGCGCC
AACCTGATGG GCGGGCGGTC GATCACGCTC AAAAATGTGC CGTCGCGCAC GGTGCAGGGG
ATGAAGTTCC CCGGCGCGCC CTATGGCCTG AAAATGGCGT GCGGCGAGAA TCCGAAGCGC
GTCTATGGCG GCAAGGGGCG GATGCCCTCT ACCCGCATGG GCAATTTTGC CGTCAATCGC
CAAACCTGGG CGAAGGCGGT CGCCTATAAG AAAAAGCTGG ACGACGGCAA GGCCGTCGAC
CGCGACCTCG CGATGGAAAC GCTCGCGGGG GTGCTCGCGG GCGAAATCCT GATCCACAAT
CACTGCTATC GCGCCGACGA AATGGCGCTG GTGATCGATA TGTCGAAGGA GTTCGGTTAC
AAGGTATCGA CCTTTCACCA CGCGGTCGAA AGCTACAAGA TTGCCGACAT GCTCGCGAAG
GAAGGCATTT GTTCGGCGAT GTGGGCCGAC TGGTGGGGCT TCAAGATGGA AGCCTATGAC
AGCGTGAACG AAAATGTCCC GCTGGTTCAC AAGGCCGGCG CCTGCGCGAT CGTCCATTCG
GACGACGCGA ACCAGATCCA GCGGCTCAAT CAGGAAGCGG CGAAGGCGTT GAAAGCCGGG
CGCCGCATGG GCATCGACGT CAGCGATGCG GTGGCGTGGA GCTGGCTTTC CTATAACCCG
GCGAAGGCGC TGGGCATCGG CGAGCAGACG GGCAGCCTGA AGCCGGGCAA GATGGCCGAC
GTCGTGCTGT GGAACGGCGA TCCGTTCAGC GCCTATACGC GGCCCGAGAA GGTCTGGATC
GACGGTGCGC TGATGTTCGA TGCGATGGAC CCGCGGCGGC GACCGGTCAG CGATTTCGAG
CTGGGGCAGC CGGGTGAAGG AGATGTGAAA TGA
|
|---|
| Protein sequence | MKTGVKGSLL AAVSLALVGC AATGGGAASA GDKPAASADK PAKFDKNPYP STYTPYPGRP
TAVRGVTIFD GEGGRIDNGV VLFAGGKIEA VGGADTAIPA GYDVIDGTGK VLTPGIIDIH
SHLGDYPSPS VDAHDDGNEA TSPTTPEVWS EHSVWPQDPG FSRALANGGV TSLQILPGSA
NLMGGRSITL KNVPSRTVQG MKFPGAPYGL KMACGENPKR VYGGKGRMPS TRMGNFAVNR
QTWAKAVAYK KKLDDGKAVD RDLAMETLAG VLAGEILIHN HCYRADEMAL VIDMSKEFGY
KVSTFHHAVE SYKIADMLAK EGICSAMWAD WWGFKMEAYD SVNENVPLVH KAGACAIVHS
DDANQIQRLN QEAAKALKAG RRMGIDVSDA VAWSWLSYNP AKALGIGEQT GSLKPGKMAD
VVLWNGDPFS AYTRPEKVWI DGALMFDAMD PRRRPVSDFE LGQPGEGDVK
|
|---|
| |