| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0951 |
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| Symbol | |
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| ID | 4082450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 975503 |
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| End bp | 977344 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 638009312 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_616002 |
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| Protein GI | 103486441 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.101575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTTTC GCCGCGTCTG GACGGGCGCG CTGCTGATCG CGGCGTCGCT TTCGGCGTGC
GGCGGCGCGT CCGACACGCC GCGCGGCGAG ATGGAGGCGC GCCGTGCCGC TTTGCAGCAG
GCCATAGCCG ACGATCCCGG GGCGATCGCC GAGCGCGTCG CTCTCGCGCG GGTGGCGATC
GCGCTCGGCG ATGGCGTCGG CGCCGAAGCG GCGGTGAAGG GGGCGATCGA GGCGGGGGCG
AATGATGCGG CGTTGCGCCC ACTGCTCGCG CGCGCCTTTG AATTGCAGGG CGACGGCGCG
CGGGCGCTGG CCGCACTCGA GGCCGGGCCG GTCATCCCCG AAATGCTGGG CGAGGCGGCG
TGGGTCGCGG GCGACGTTCA CCTTGCGAAC GGCGATCTGG CGGCGGCGCG CGAGGCCTAT
GACCGCGCGG TGCACGAGCT GCCGCGCAGC TCCGCGCTGT GGGTCGATGT CGCGCGCTTT
CGCGACGCCA GCGCCGATAT GCGCGGCGCG CGCGACGCGG TCGATTATGC GATTGAACTC
GACGCGGCGA ACAGCGCGGC GCTGGCGTAT AAGGCCAATC TGGTGCGGAG GGCCGAAGGG
CTAACCGCGG CGCTGGCGTG GTACGACCGG GCGCTTGCCG CCGATCCGGG CAATGCCGCG
GCGCTGATCG ATCAGGCGGC GACGCTCGGC GATCTTGGCC GCTACCGCGA CATGCTGACG
GCGCTGCGCC GTGCGGCGGT GCTCGTCCCG CGCGAGCCGC GGATCCATTA TCTGCAAGCC
GTGCTGGCGG CACGCGCGGC GAATTACCGG CTCGCGCGCA GTCTGCTCCA GCGCACGCGC
GGCGCGCTCG ATTCCGAGCC GGGGTTCATG CTGCTGAGCG CGGTGGTCGA GCTGGAGCTG
GGCGGCGAGG CGGTGGCGGC GAGCTGGGCC GAGCGACTGC TTGCCGAACA GCCGCATAAT
TTCGCCGCAC GGCGCCTGCT GGCGGCGGCC GAATGGGCGG GCGGCGATGC CGAGGCGGCG
CTCGCGGCGC TGCGTCCGCT CGTCGCGCGG CCCGACGCCG ACAGCTGGTC GCTGCTGCTC
GCCGCGCGCG CGGCGGCCGA ACAGGGACGC GATATCGAAT CGGCCGGCTA TCAGGCGCGC
GCCGCGACGC TGGACCGCGG CGAGGCGGTG CCCTTTGCCG TCGATGCCGA TTATGGCCTG
CTGACGATGG CCGCCGACGC CGCGCCGCTC GATCCGGCGA CCGTGATCCC GGCGATTTCG
GCGGATATGG CGCGCGGCAA CACGGCGCGC GCGATCGAGC GCGCGGTCCG GCTGCGCGAT
GCCAATCCGG GAGTCGCCGA CGCGCATATG CTGCTCGGCG ACGCGGCGCT CGCGGGCGGG
CGCTACGCGC TGGCGGTCGA GGCCTATCGC GCCGCCCGCA ACCTCGACGC GGGGGAGCGC
ACGACGTTGC GGCTCGCGAA TGCGCTCTAT CGCGCCGGCG ACGCGGCGGG GTCGGGCGCG
GCGATCATGG CGTTACGCGA CCGTCAGCCG TCGAGCGTCG CCGCCGATCG GATCGCGGGC
CATCTGGCGA TCGAGCTTGG GCACTGGGAC GCGGCGATCG CGCATTTCGA GCGCGTGGGC
AGCCGGATCG GCGATCGCGA CGCCGTGGTG CTGCGCGAAC TCGCACGCGC GTGGGCGGCA
AAGGGCGACG ATGCGCGCGC GCTGGTGCTG ATCGACCGCG CCTATCGGTT GCAGCCGCTG
AACGCGGGCA TCATGGAATT ATACGCGGCG CTGCTGGAGC GGCGCGGGAA GCGCCAGGCG
GCGGCGGATT TGCGCGACAA GGCGGCGCAG ATCGGGCGGT AG
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| Protein sequence | MGFRRVWTGA LLIAASLSAC GGASDTPRGE MEARRAALQQ AIADDPGAIA ERVALARVAI
ALGDGVGAEA AVKGAIEAGA NDAALRPLLA RAFELQGDGA RALAALEAGP VIPEMLGEAA
WVAGDVHLAN GDLAAAREAY DRAVHELPRS SALWVDVARF RDASADMRGA RDAVDYAIEL
DAANSAALAY KANLVRRAEG LTAALAWYDR ALAADPGNAA ALIDQAATLG DLGRYRDMLT
ALRRAAVLVP REPRIHYLQA VLAARAANYR LARSLLQRTR GALDSEPGFM LLSAVVELEL
GGEAVAASWA ERLLAEQPHN FAARRLLAAA EWAGGDAEAA LAALRPLVAR PDADSWSLLL
AARAAAEQGR DIESAGYQAR AATLDRGEAV PFAVDADYGL LTMAADAAPL DPATVIPAIS
ADMARGNTAR AIERAVRLRD ANPGVADAHM LLGDAALAGG RYALAVEAYR AARNLDAGER
TTLRLANALY RAGDAAGSGA AIMALRDRQP SSVAADRIAG HLAIELGHWD AAIAHFERVG
SRIGDRDAVV LRELARAWAA KGDDARALVL IDRAYRLQPL NAGIMELYAA LLERRGKRQA
AADLRDKAAQ IGR
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