| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0947 |
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| Symbol | |
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| ID | 4082446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 968400 |
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| End bp | 970451 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009308 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_615998 |
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| Protein GI | 103486437 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0779656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACACCG CGCGTATCGC CATGCTCGTC TGCACCGCGC TGGCCAGCGG CACCGCCTTC
GCCGCCGAAG CGGCTTCGGC CGATTTCGAG GATCGGGACC AGATCGTCGT CACCGGCTAT
GCGGGGACCA AGACCGATAC CGCGCTGATC GAACTGCCCC AGCCGGTCAA GGTCATCACC
GCCGACCAAT ATGAGGCGCA GGGCGCGATC AGCATCAGCG ACACGGTGAA ATATGCCGCG
GGCGTGCTCG CCAACCCCTA TGGCCGCGAC ACGCGCGTCG ACGGCTTCAA CGTGCGCGGC
ATCGACGCGC TGCAATTCCG CGACGGGATG CGCGACATTT TTTCCTTCTA CGCCAGCATC
ACCTCGGACC CCTATAATTT CGACCGCGTC GAGATTGTGC GCGGCCCGGC GTCGGTGCTG
TTCGGCCAGG GGTCGATCGG CGGCCTCGTC AACCTTGTGT CGAAAAGCCC CGGCTTTGAA
ACGCAGGGCG AAATCAACCT CGTCTATGGC AGCTACGACC GCAAGGAAGT GCTCGCCGAC
GTCAATCTCG CGCTGTCCGA CAGCTTTGCT GTCCGTGCGG TCGGTCGCGC GCGCGACGCC
GACACCTATG TGAAGCACGT CCCCGACGAC CGCGTGATGT TCGCCCCCTC GCTCCGCTGG
CAGCCGACCG CCGACACCGA CGTCACCCTC ACCGGCCTCT ATCAGGAGGA CGACACCGGC
TCGACGTCGC AGTTCCTGCC GATCATCGGC ACCTTCCGCC CCAACCCGGG CGCGCCGGGG
ACGCTCGACC GCTACACTTT CGTCGGCAAA CCCGGCTGGG ACCGCTACGC CGGCCGCTCG
CTCCAGGGCA TGGCGAGCGT CGCCCACGAT TTTTCGGACG CGGTGCGGCT CAGCCTCAAG
GCGCGCTATA TCGACAGCGA CCTTGAGTAT TTCACCCATT ATACGAACAG CTATTCGAAC
CCCACCGATC CCTTCGCCGC CGACCGCCGC ACCATCGGCC TTTATGCCGA TGCCAGCGAC
GCGCGGATGA ACGTCTTTTC GACCGACAAT AATCTCCAGT TCCATTTCAA CACCGGCGCG
CACGTCGAGC ACAAGCTGCT CGTCGGCCTC GATTACAGCT GGAACAGGGT GGGCAAGCGT
TACGCCGGCG GGCTGGAGAC CATCGACCTT TACGACATCG ACTATGACGC GCTGCTCACC
TACGATCCGA GCGGACCCTT TTTCAGGGAA TCGCAGAAAC AGCTCGGTGT CTATGTCCAG
GATCAGATCC GCTTCTTCGA CCGCGTTTCG GTCGTGCTCG GCGCGCGGCG CGACCGCGTG
ACCGGCTCGT CGGGGCAAAA GGACAATGCC ACCACCTTCC GCGCGGGCAT CATCGGCGAC
GTCGGCGCGG GCTTCTCGCC CTTCTTCAGC TATACCGAGA GTTTCCTGCC GATCGCGGGG
TCGCTCAGCG ACGTCGACGG CAACCTCGGC GACCCGTTCA GGCCGCAGAC CGGCACGCAG
TTCGAGGCGG GGGTGAAATG GCAACCCGGC CCCGGCACCC TCGTCACCGT CACCGGCTTC
CGCGTCAAGG AACGCAACCG CGTCATTTAC GGCGAGGGCC AGTCGATCAC CCAGTCGGGC
GAACTCACCA CCAGGGGCAT CGAGGTCGAG GCAAGCCACA GCCTGCCCGG CAATTTCGAC
CTGCTCGTCA ACTATGGCTA TAACAAGCTG AAGTCGGAGG TGAACACCGA CCTCGACTAT
CTGCCGCGCC ACATCGCCTC GATCTGGTCG ACCAAGACCT TTGGGCTGAC GGGTGAGGCA
CAGCTGCGGC TCGGCGCCGG GGTCGTCTAC ACCGGCAAGC GCCGCTCGAC GGGCCCTGCC
TGGTCGCTGG TCACCCCCAG CAACACCACC GTCGATGCGC TCGCCGAGGT CAGCTGGAAC
AACTGGCGCT TGGCGATCAA TGCGACGAAC CTGCTGGATA ACAGATATTT CGCCTCCTGC
CTCGCGCGGG GCGACTGTTT CATGGGCGCG CCGCGCAATG TGATGGCGAC CGTCGGTTAC
CGCTTCCGAT GA
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| Protein sequence | MNTARIAMLV CTALASGTAF AAEAASADFE DRDQIVVTGY AGTKTDTALI ELPQPVKVIT
ADQYEAQGAI SISDTVKYAA GVLANPYGRD TRVDGFNVRG IDALQFRDGM RDIFSFYASI
TSDPYNFDRV EIVRGPASVL FGQGSIGGLV NLVSKSPGFE TQGEINLVYG SYDRKEVLAD
VNLALSDSFA VRAVGRARDA DTYVKHVPDD RVMFAPSLRW QPTADTDVTL TGLYQEDDTG
STSQFLPIIG TFRPNPGAPG TLDRYTFVGK PGWDRYAGRS LQGMASVAHD FSDAVRLSLK
ARYIDSDLEY FTHYTNSYSN PTDPFAADRR TIGLYADASD ARMNVFSTDN NLQFHFNTGA
HVEHKLLVGL DYSWNRVGKR YAGGLETIDL YDIDYDALLT YDPSGPFFRE SQKQLGVYVQ
DQIRFFDRVS VVLGARRDRV TGSSGQKDNA TTFRAGIIGD VGAGFSPFFS YTESFLPIAG
SLSDVDGNLG DPFRPQTGTQ FEAGVKWQPG PGTLVTVTGF RVKERNRVIY GEGQSITQSG
ELTTRGIEVE ASHSLPGNFD LLVNYGYNKL KSEVNTDLDY LPRHIASIWS TKTFGLTGEA
QLRLGAGVVY TGKRRSTGPA WSLVTPSNTT VDALAEVSWN NWRLAINATN LLDNRYFASC
LARGDCFMGA PRNVMATVGY RFR
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