Gene Sala_0921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0921 
Symbol 
ID4083131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp933804 
End bp935012 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content62% 
IMG OID638009282 
Productmajor facilitator transporter 
Protein accessionYP_615972 
Protein GI103486411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATC CCGCGCCGCA TCGGCACCAG TCGCTCGCTT TCATGCTGCT CTATGCCTTG 
GCGGTAGCTG GCGGAAGCAT GGCCTATGTC CCGTTCCTGA CCATCCTGCT TCCGTCGCGG
ATTGCGGTGC TGGCAGGGTC GGCCGACGTC GAATGGCTCG GGTTGCTGAC ATTCGCGGGG
GCCATTGCGG CCAGTGTTGG CGGAATCCTG TTCGGTTGGC TCAGCGACAT CACGAACAGT
CGGCGATGGT GGATATTGTC GGGGCTGGTC CTGACAGTCG CGCTGCTCCT TGCCGTCCCG
CTGGCGGACG ATCTGTGGAC ACTCGTGTCG ATCATCATTT GCTGGCAGCT CGCGCTCAAC
ATGGTCCTTG GCCCCCTTGC AGCGTGGGGC GGCGACCTCG TTCCCGACGA TCAGAAGGGT
CTGCTGGGCG GCCTTCTCGC CTTCGCGCCC GCGCTTGGCG CCTGGTCGGG GGCGCTCGTC
ACGCTGCCCG TTCTCGAGAC GTTCGAATCC CGACTTTTCG CGCTTGCGTT TCTGGTGGTG
GCCGCCGTCA CACCGGCGAC GGTTTTTGCA CGCCCCAGAC GCCTCGAGAT GCTCGGGCGC
GCACCATCGC TGGATCGCGA TGGACGGATC GGGACCCTGT CAAAGGGACC GGCCGTGCGG
ATGTGGTTCG CCCGCTTTCT GGTCCAGATT TCCGAAGCGG CGTTATTCGC CTATCTCTAT
TTCTGGTTTC GCTCGATTGA CCCGGACATG GGCGATAACG AAAAGGCGCG GCTGTTCAGT
CTTGCCCTCA CCATTGCGAT ACCCATCGCC CTTTACTGTG GCCGCTGGTC CGATCGCAAT
GACCGTCCAT TTCTGCCGCT TGTGATCAGC AGCGCGGTTT CGGCGGCCGG GATGCTCGGT
ATGGCGCTCG CTGCCTCGGC CGACCTCGCC AAGCTCGCCT ATCTTCTTTT CGGTATCGCA
ACCACCGTTT TTCTCGCCTT GCATGCTGGT CAGACGCTTC GAATTCTGCC GCGTTCGGAT
CGCCGTGGAC GCGATCTAGG GGTTTTCAAT CTGACCAACA CGCTCCCTTC GCTGATTATG
CCGCTGCTGA CGATCTCGGT CGTCCCGGGC TTCGGTTTCG AGACGCTGTT TCTGGTGCTC
GCGACGCTTG CCATTCTTGC GACGTTGATC CTGACGACAA TTCCGCGTCC CAGTCCCGGT
CGCGCCTAG
 
Protein sequence
MDDPAPHRHQ SLAFMLLYAL AVAGGSMAYV PFLTILLPSR IAVLAGSADV EWLGLLTFAG 
AIAASVGGIL FGWLSDITNS RRWWILSGLV LTVALLLAVP LADDLWTLVS IIICWQLALN
MVLGPLAAWG GDLVPDDQKG LLGGLLAFAP ALGAWSGALV TLPVLETFES RLFALAFLVV
AAVTPATVFA RPRRLEMLGR APSLDRDGRI GTLSKGPAVR MWFARFLVQI SEAALFAYLY
FWFRSIDPDM GDNEKARLFS LALTIAIPIA LYCGRWSDRN DRPFLPLVIS SAVSAAGMLG
MALAASADLA KLAYLLFGIA TTVFLALHAG QTLRILPRSD RRGRDLGVFN LTNTLPSLIM
PLLTISVVPG FGFETLFLVL ATLAILATLI LTTIPRPSPG RA