| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0889 |
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| Symbol | |
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| ID | 4082789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 896772 |
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| End bp | 897488 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009250 |
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| Product | regulatory protein GntR, HTH |
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| Protein accession | YP_615940 |
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| Protein GI | 103486379 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATAG CTTCGCATCC ACCGACTCAC GGCGAAACCC TGGTCAGCCG GACCGCAAGG
GCGCTTTCCG ACCTTAGCCT GTCCGTCGCG CCCGGTGATT ATCTTGGCGC GGAGGGGGAG
TTGCTGGAAC GGCTGGCGGT CAGCCGCCCG ACGCTGCGGC AGGCAGCCAA AATCGTCGAG
AGCGATCGTC TGATCCGAAT CCGGCGCGGA ACCGGGGGCG GATATTTTGC CGACCGGCCC
GACGCGCGCG ATGCGATACG CTCGCTCATC CATTTCCTGC GTTTGCGCGG CGCTACCCTC
GCCGACGTGA TCCAGGTGAC GCGCCCAATC GGCGAGGAGG CGGCTGCCGC TGCCGCACGG
CTGCGAACGG CGGCGGATGC AAAACAGGTG GCGGCGTTCG TCGCGACCAT CGACGACCGG
GACAGCGCGC GCGAGCTGAT TGCCGGGGAA GTCGAAATGG CGCGCATGAT TTCGGCGCTC
AGCGGCAATC CGGTGATCGA GCTGGTGATG GAGATCGGTT ACAGTTTCGG GCTGGGAGAA
CGCGGCTTTG ATCTTTATTC CGATGCCGAT CGTCGTGCCC GCGCGCGCGC GCTGCAACGC
AGCCTGCTCA CCGCTATCGC CGACGGCGAT CCCGAAGTCG CCCGGCTCAT GATGCGGCGG
CGGTCGGCTC TGTTCGATAG CTGGCTGGAA CCTGACCGAA GGGAAGACAC GGCATGA
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| Protein sequence | MDIASHPPTH GETLVSRTAR ALSDLSLSVA PGDYLGAEGE LLERLAVSRP TLRQAAKIVE
SDRLIRIRRG TGGGYFADRP DARDAIRSLI HFLRLRGATL ADVIQVTRPI GEEAAAAAAR
LRTAADAKQV AAFVATIDDR DSARELIAGE VEMARMISAL SGNPVIELVM EIGYSFGLGE
RGFDLYSDAD RRARARALQR SLLTAIADGD PEVARLMMRR RSALFDSWLE PDRREDTA
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