| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0880 |
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| Symbol | |
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| ID | 4082670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 885904 |
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| End bp | 886665 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009241 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_615931 |
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| Protein GI | 103486370 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTATCG CGGGAAAAAA TGCAATCGTC ACCGGCGGCT CGCGCGGGAT CGGCGCGGCG
ATCGTGCGGC GGCTGGGCGA GGGCGGCGTT CATGTCGCGA TCAATTATGT CGGCAACCGC
TCTGCTGCGG AGACGCTTGC TTGTGAAATC ACGGCCGCGG GCGGCAATGC GTTCGCGGTT
CAGGCCGACG TGTCCACGCT GGCGGGTATC GATGCGCTGT TCGCCGCCTG TGACGAAGCC
TTTGGCGGCC TGCCCAACCT CGACATATTG ATCAACAACG CGGGCGTCGG CCGCGGCGAC
CGCGACGGCT CCCTTGCAGG GGCGGATGAG GCACTGTTCG ACGAGTTATT GGCGGTGAAT
GTCAAGGGAC CGCATTTCGT GACGCAAAAG GCGTTGTCCC GGCTCCGCGA TGGCGGCCGG
ATCGTCAATA TCGGGTCGAT GTCGGGCAAG GTCGGCCAGC CGTTCGCGGC CAGCTATGCG
ATGACCAAGC GGGCCATACA AAGCCTGACC TTTTCGACCG CGCTTGCCGT CGCAAAGCGG
CGGATCACCT GCAACTGCAT CGCTCCCGGT GCGGTGGCGA CCGACTTCAT CGCCGGGCTG
CGCGCCAAGC CGGGGTGGGA CGAGGCGACC GCGAAACACA CGCCGATGGG TCGCTTGGGG
GAACCCGACG ATATCGCGGG CGCGGTGATG ATGTTGCTGG GCGACGATGC GCGCTGGGTG
ACCGGACAGG TGATCGAAGC CAGCGGGGGC CTCGCCCTCT GA
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| Protein sequence | MSIAGKNAIV TGGSRGIGAA IVRRLGEGGV HVAINYVGNR SAAETLACEI TAAGGNAFAV
QADVSTLAGI DALFAACDEA FGGLPNLDIL INNAGVGRGD RDGSLAGADE ALFDELLAVN
VKGPHFVTQK ALSRLRDGGR IVNIGSMSGK VGQPFAASYA MTKRAIQSLT FSTALAVAKR
RITCNCIAPG AVATDFIAGL RAKPGWDEAT AKHTPMGRLG EPDDIAGAVM MLLGDDARWV
TGQVIEASGG LAL
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