| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0877 |
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| Symbol | |
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| ID | 4082667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 883713 |
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| End bp | 884624 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638009238 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_615928 |
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| Protein GI | 103486367 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTGC CCGCCCCGCC CCCGCTCGGT GCCAAGGCGC TGCCCGACGG CACCTATGCG
GGCCAGGTCG TGGCCGTTAC CGGCGGGGGC ACCGGGCTGG GCAAGGGCAT GGCGATCGAG
TTTGCGCGGC TGGGCGCGAA GGTCGCGATA CTTAGCCGCA AGCCCGACCA TCTCGACGCC
GGCGTCGCGG CGATCCGCGC GCTGGGCGCG GAGGCGATCG CCGTCGCCTG CGACGTGCGC
GACGCGGACG CTGTCGCGCA GGCGTTCGAC ACAATCGAAG CGAAACTGGG CGCGGTCGAT
GTGCTCGTCA ATAATGCGGC GGGCAATTTT CCGGCCCCGG CAGAAGAAAT GACGCCGAAC
GGCTTTCGCA CCGTCGTCGA TATCGTCCTG AACGGCACCT ATAATTGCAG CCGCGAATTC
GCGATACGGC GACTGGCAGC GAAACTGCCG GGCGCGATAT TGAACATCGG CGCCACCTAT
AGCTGGACGG GCGGGCCGGG GACGTCGCAT TCGGCGGCGG CCAAGGCGGG CGTGACCAAC
CTGACGCAGA GCCTGGCGGT CGAGTGGGCG CCCGACGGAA TCCGCGTCAA TTGCATCGCG
CCTGGCCGTT TTCCGCACGA CGATCTGCCC GCGCACATGA CCCGCCATCG CGAGGGCGAG
CGCGGCGACA ATACGATTCC GGGAATGCGC GTCGGCGAGG TGCGCGAACT GGGCTGGGCG
GCGACCTTCC TCTGTTCGCC CTATGCCAGC TATATCAGCG GTCACACGCT GGTCGTCGAT
GCGGCGAACT GGCTGCGGCG CAGCCTGGTG ATGCCCGAGT TTGTGCCGAT CCGCGAACAA
TTTGGACGGC GTGCCGTCGA TAGCGGCAGC GCCCGCGCCG CCATTGCCAA AACCAGAGGG
GACCGGCCAT GA
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| Protein sequence | MALPAPPPLG AKALPDGTYA GQVVAVTGGG TGLGKGMAIE FARLGAKVAI LSRKPDHLDA
GVAAIRALGA EAIAVACDVR DADAVAQAFD TIEAKLGAVD VLVNNAAGNF PAPAEEMTPN
GFRTVVDIVL NGTYNCSREF AIRRLAAKLP GAILNIGATY SWTGGPGTSH SAAAKAGVTN
LTQSLAVEWA PDGIRVNCIA PGRFPHDDLP AHMTRHREGE RGDNTIPGMR VGEVRELGWA
ATFLCSPYAS YISGHTLVVD AANWLRRSLV MPEFVPIREQ FGRRAVDSGS ARAAIAKTRG
DRP
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