Gene Sala_0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0876 
Symbol 
ID4082666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp882964 
End bp883716 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content65% 
IMG OID638009237 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_615927 
Protein GI103486366 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC CGCTCGTCAT CCGGGAGGAC TCCGGCGGCA TCTGTACGCT GACGCTCAAC 
CGCCCCGACA AGCGCAATGC CATCAACCGT GACCTGTTCC GTGCCTTTCG TGCCCACATC
CGCGACCTCG AAAGCGATCG CGATACGGGG CTGGTGGTCA TCACCGGCGC GGGCGGGCAT
TTCTGTGCCG GTCACGACCT GAAACAGGCG CCGCACGCCG ATGCACTCGG TTGGCTTCGC
CAGGAAATGC TGATTCTGGA ACGCCTGACC AAGCTGCGCC AGCCGGTCAT CGCAAAGGTT
TCCGGGAGCT GCTATACCGG CGGCCTCGAA CTTGCGCTGG CCGCCGATTT CATCGTCTGC
GGCGACAGCG CCCGTTTCGC CGACACCCAC GGCAAATGGG GCCTTGTCCC CGGCTGGGGC
CTGTCCCAGC GCCTGCCCCG CCGGATCGGT CAGGCCAGGG CACTGGAGAT GATGTTCACC
AGTCGTCCCT ATAGCGGCGC CGAGGCAGCG GCGATGGGCC TTGCCAATCA TTGCGTCGCC
GACGCCGATC TGGACGCGAA AGTGACCGAA CTCGCCGCGC TGATCCTGGA CAACAGCCGC
CACAGCAATG CCGAGAACAA GCGGTTGGTC TATGACACCG ACGGCATGGC GCTGGACACC
GGCCTTTCCC ATGAATTGAT GCGTAATGCG GGGTTCGACC CGGCCATGCG GCAAAAGGGC
GAAGCGATCG GCAGCGCGCG AAAGGGCGGC TGA
 
Protein sequence
MSKPLVIRED SGGICTLTLN RPDKRNAINR DLFRAFRAHI RDLESDRDTG LVVITGAGGH 
FCAGHDLKQA PHADALGWLR QEMLILERLT KLRQPVIAKV SGSCYTGGLE LALAADFIVC
GDSARFADTH GKWGLVPGWG LSQRLPRRIG QARALEMMFT SRPYSGAEAA AMGLANHCVA
DADLDAKVTE LAALILDNSR HSNAENKRLV YDTDGMALDT GLSHELMRNA GFDPAMRQKG
EAIGSARKGG