| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0862 |
|---|
| Symbol | |
|---|
| ID | 4079998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 870297 |
|---|
| End bp | 870755 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638009223 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_615913 |
|---|
| Protein GI | 103486352 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.529832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACCGC GCTTCTCCGA TTTCGAACGA TTCGCCGACG AGCTTGCCCG GCTGCGTGGA
CGGATGCGGG CGCTCTACGC CGACACGCGC GCGCAGAGCG GATTGGCCGA AATGGAGCTG
ACGGTGCTCA CCGCCGTGGT CAACGCCGCG ACGCCGCCCA CGGTGGCGCA GATCGGCCGC
AGCCTGGGGC ATCCGCGCCA GGTGGTGCAG CGGGCGGCGA ACCGCCTCGC CGCGCTCGAC
CTGATCGACT TTGCCGACAA TCCCGATCAC AAACGCGCGT CCTTGATCAT CGCGACCGAT
GCCGGGCGCG CGCTCAAGGC GGCGGATCAT GACCGCGCGC AGGCGGTGAC GACCGATATA
CTCGCGCGGA TCGACGGGGA AATGTTCGCC GACGCGGCCG ACCGGTTGCA AGAGATACGC
CAGGGGATCG AAACCTATTT GCGCGCGCGC GACCGATGA
|
|---|
| Protein sequence | MSPRFSDFER FADELARLRG RMRALYADTR AQSGLAEMEL TVLTAVVNAA TPPTVAQIGR
SLGHPRQVVQ RAANRLAALD LIDFADNPDH KRASLIIATD AGRALKAADH DRAQAVTTDI
LARIDGEMFA DAADRLQEIR QGIETYLRAR DR
|
|---|
| |