Gene Sala_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0852 
Symbol 
ID4079988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp859857 
End bp860654 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content63% 
IMG OID638009213 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_615903 
Protein GI103486342 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.938482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC TGCTGATCGA AGATGATGCG GGGGTCCGCA TCATAACGCT CAACCGGCCC 
GACCGTTTGA ATGCGCTTAC CGGTTCGATC ATGGCATCGC TTGCCGATGC CTGCGCCGAC
GCCGCGCGCG ATGCGTCGGT GGGCTGTGTC GTCGTGACCG GCGCGGGCCG TGGCTTTTGC
GCGGGCGGCG ACCTGAAGGA AGGCGGTGCC GACAAGGCCG TGGTGCCGCC GAACGCCGAG
GCAGGCAGCC GAACCGAACA GAGTTTCGCC CGGCTGCGCG GCTTTATGGA AACCTCGCGT
CTCCTCCATG AAATGCCCAA GCCGACCATC GCGATGGTCA ATGGCCCGGT GGCCGGGGCT
GGAATAGGCA TCGCGGGGGC CTGCGATCTG CGCTTCGCGT CGAAAAGCGC TACCTTTCTG
ACCGCTTTTG ACCGGATCGG GGCGGGGGGC GATTTTGGTT CGACCTGGTT CTGGACCAAG
ATTCTGGGCA CCGGGGTGGC GCGCGAGCTG TTCTTCCTTG GCGAAAAATT GTCGGCCGAG
GAGGCGTTCG CCAAGGGCAT TTATACGCGC TTGTTTGAAG AAGCGGACTT GCGCCCGGAA
ACGATGCAGG CCGCCCGCCG CCTCGCCGAC GGGCCACGCA TGGGCTATCG GTACATGAAG
GCGAACCTCA ACAATGCGGA AGATTGGGCC TTCGAAGCCG CGCTTGATGC CGAAGCATTG
AACATGGGGC TTTCGACCGG CGCAACCGCG TTGATCTGGC GCGAAAAGAA AAAGCGGGAA
GAACAGGGCG GTGGCTGA
 
Protein sequence
MSELLIEDDA GVRIITLNRP DRLNALTGSI MASLADACAD AARDASVGCV VVTGAGRGFC 
AGGDLKEGGA DKAVVPPNAE AGSRTEQSFA RLRGFMETSR LLHEMPKPTI AMVNGPVAGA
GIGIAGACDL RFASKSATFL TAFDRIGAGG DFGSTWFWTK ILGTGVAREL FFLGEKLSAE
EAFAKGIYTR LFEEADLRPE TMQAARRLAD GPRMGYRYMK ANLNNAEDWA FEAALDAEAL
NMGLSTGATA LIWREKKKRE EQGGG