Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0851 |
Symbol | |
ID | 4079987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 858963 |
End bp | 859808 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638009212 |
Product | hypothetical protein |
Protein accession | YP_615902 |
Protein GI | 103486341 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.110102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGCAGT CCGAATTCGC CGGCCGTTCG GTCATTTGCG TGCGCCGCGA CGTCAAGATC AACCAGCGCG GCGAAGTCGT CGCCGTCTAT CGTATCTTGC GGGTGCTGAC CGAGCGCAAG ACCGCTGCCA AAAAGGGCAA ATATTCGGCA ATCGAGCCTG CGACCTACAC CGATGAGGAA ATGCAGGCGA TCGAGGATAT CTACGCGCAG GAGAAGGTTC AGGGTGCCGA GAAGCGGTGG TTCGAGAGCG TCGAGAAAGG CGATTCGCTG GGTTTGCAGG CCAAGGGGCC GCTGACCGTC ACCGACGTCA TCTGCTTCCA TGCCGGCGGC TATGGCTTCG TTCCCTACGC GCCGACGGCG AACCGTCTCG CACACAAGAA TCGCCAGCGT ATCCCGGCCT TCTACATCAA GAATGAATAT GGCGTTCCCG ACGTCGCGCA GCGCCTGCAC TGGGATCCCA CCTGGGCACA GGCGATCGGC AATCCGATGG CTTATGACTA TGGGGTGATG CGCGAAAATT ATCTTTGGCA ATATCTCAGC GACTGGGCGG GCGACGATGC CGTCATCACC CACGTCCATG ACGAAATCCG CAAGTTCAAC TATATGGGCG ACGTGCAGCG GGTCACTGGC GAAGTGCTTG CCAAGCGCCA GGAGGGAAAG CAGGGCCTGG TCGATGTGGC CGTCAAGTTC ACCAACCAGC GCGACGAGGA AACGGTGCGG GCGACCGCCA CCATCGCGTT GCCGACCAGG GACCGGCCGC AGCCGCTGTA TCCGGAAGTC CCGGAGGAGC TGGCCGAAAA GGCGGTCAAG ATGCTCGCCC GGCACCGCGA ACTCGGCGGG GATTGA
|
Protein sequence | MKQSEFAGRS VICVRRDVKI NQRGEVVAVY RILRVLTERK TAAKKGKYSA IEPATYTDEE MQAIEDIYAQ EKVQGAEKRW FESVEKGDSL GLQAKGPLTV TDVICFHAGG YGFVPYAPTA NRLAHKNRQR IPAFYIKNEY GVPDVAQRLH WDPTWAQAIG NPMAYDYGVM RENYLWQYLS DWAGDDAVIT HVHDEIRKFN YMGDVQRVTG EVLAKRQEGK QGLVDVAVKF TNQRDEETVR ATATIALPTR DRPQPLYPEV PEELAEKAVK MLARHRELGG D
|
| |