| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0788 |
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| Symbol | |
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| ID | 4080432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 795615 |
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| End bp | 796361 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638009148 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_615841 |
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| Protein GI | 103486280 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0987211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0803398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGG CTGCCCCGCC CCCCGTCATC GTCCTCGTCC GACCGCAGCT TGGCGAGAAT
ATCGGCAAGG CGGCGCGGGC CATGCTCAAT TTCGGGCTGA CCGAACTGCG CCTCGTCAGC
CCGCGCGACG GCTGGCCCAA TCCAGATGCC GGGCCTGCGT CAGCCGGGGC CGACGTCGTG
CTTGCGGGCG CAAGGGTTTT TGAAACGCTG GCCGAGGCGG TCGCCGACTG CACGGACATT
TATGCCACCA CGGTGCGCAA GCGCGGCGTC ACCAAAGCGG TGCTCACGCC CGAAGCGGCC
GCGCAGAAGG TCCACGCCCA GCCGGGGCGT TCGGCCTATG TCTTCGGCCC CGAACGATCG
GGGCTCGAAA CCGACGATGT CGCACTGGCG CACGCGATCG TCACGGTGCC GATCAATCCG
GCCTTCGGTT CGCTGAATCT GGCGCAGGCG GTCATTCTGC TCGCCTATGA ATGGTCGAAA
CATGTGCCCG GCGACGGCCA TGTTGCGCTC GCCAGCCCGC CCGAAGTGCC GCTCGATCCG
CCCGCCCCGC ACGGCGAGCT CGAAGAGCTG ATCGGGCACT TCGTGCGCGA CCTTGACCAG
AGCGGCTATT TTTTCCCGCC CGAACGCCGC GACGCGACGC TCCGCGCGCT GCGCACGACG
CTCACCAAGA CGGGCTGGTC GCACAACGAC ATCCGGATGA TGCACGGAAT CATTGTGGCT
CTTGGCCGGG CGCCAAGAAC GCGCTGA
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| Protein sequence | MTAAAPPPVI VLVRPQLGEN IGKAARAMLN FGLTELRLVS PRDGWPNPDA GPASAGADVV
LAGARVFETL AEAVADCTDI YATTVRKRGV TKAVLTPEAA AQKVHAQPGR SAYVFGPERS
GLETDDVALA HAIVTVPINP AFGSLNLAQA VILLAYEWSK HVPGDGHVAL ASPPEVPLDP
PAPHGELEEL IGHFVRDLDQ SGYFFPPERR DATLRALRTT LTKTGWSHND IRMMHGIIVA
LGRAPRTR
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