| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0766 |
|---|
| Symbol | |
|---|
| ID | 4080909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 773221 |
|---|
| End bp | 774732 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638009125 |
|---|
| Product | replicative DNA helicase |
|---|
| Protein accession | YP_615819 |
|---|
| Protein GI | 103486258 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.13273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAC TCGCCCTTAT TCCGACCCCG GCAACCGCCG GGGATGAGCG CCAATTACCA
CGCAATATCG AGGCCGAGGC CGCGTTTCTG GGCGCGATCC TGATCGACAA TCGAGTCGTC
GAGGATCTGC CCGTCCAGCT CACCCCCGAC CATTTCTTCG AACCACTGCA CGGCCGCATC
TTTCAGCAGA CGATGGCGCT GATCGAACGC AACAGCATTG CAACGCCGGT GACGCTCAAG
CCCTATTTCG AGGCCGACGA GGCGATGAAG GCGGTTGGCG GCGTCGGCTA TCTGGCGCAG
CTGACGGGCA GCGGCGCGGG GCTGATCGGC GCGCGCGATT TCGCCAAGCA GATTTACGAC
CTCGCGCTGC TTCGCGAACT CGCGGGGGTC GGGCGGACGC TCGTCGAGAA TGCGCTCGAC
ACCAGCGAGC GTGTCGATCC GCAGGCGCAG ATCGAGGAGG CCGAGACGGC GCTTTATCGC
GTCGCGGGCG GCGAGGCCGA AATGGGGTCG GTCAAAAGCT TCAGCCAGGC GAGCCTCACC
GCGCTGCAGG CGGCCGAGCG CGCGCTCAAT TCGGGTGGCC ATCTGTCGGG CATCACCACC
GGCATCGCGA GCATGAACGC CAAGATCGGC GGGATGCACA ATTCCGACCT GATGATCCTC
GCGGGGCGGC CCGGCATGGG CAAGACGTCG CTCGCGACCA ACATCGCCTA TAATGCCGCC
GAACGCTGGC GCCGCGACGA GGAAGACGGC ATTCCGCCCG AAAAGAATAT GGGCGCCAAG
GTCGCTTTCT TCAGCCTCGA AATGTCCGCC GACCAGCTGG CAACGCGCGT GCTCGCCGAA
CAGTCGGGGG TGTCGGGCGA GGCGCTGCGC ATGGGCAAGA TCAGCAAGGA ACAGTTCCAG
CAGCTGTCGC GCGCCGCACA GACGCTCCAG ACGCTGCCGC TGTATATCGA CGACACGCCC
GGCCTGACGA TCGCGGGGCT GCGCACGCGC GCGCGGCGGC TCCAGCGGCG CCACGGCATC
GGCTTCATCA TCGTCGATTA TCTTCAGCTG TTGCAGGGAT CGTCGCGCAG CGGCGACAAC
CGCGTGCAGG AAATATCAGA AATATCCCGC GGTTTGAAGA CGTTGGCGAA GGAACTCAAT
GTCCCGGTGA TGGCGCTGTC GCAGCTGAGC CGCCAGGTCG AAAGCCGCGA GGACAAGCGC
CCGCAACTCT CCGACCTGCG TGAATCGGGG TCGATCGAGC AGGATGCCGA CATGGTGCTC
TTTGTGTTCC GCGAGGATTA TTATGTCGCG GCGCGCGAAC CCAAGCGCCC GGTCGAGGGC
GACGATGTGA AGATACACGC GGCGCACGAG GAATGGGCGG CCGAAATGGA GCGCGTCTTC
GGCCTCGCCG AAGTCATCGT CGCCAAATCG CGTCACGGTT CGACCGGCAA GATCCGCCTG
CACTTCGAGG CGAAGACGAC GAAGTTCAGC GACCTCGCCG ACGACAGCAT GGCGTATGAG
GATTATGAGT GA
|
|---|
| Protein sequence | MPELALIPTP ATAGDERQLP RNIEAEAAFL GAILIDNRVV EDLPVQLTPD HFFEPLHGRI
FQQTMALIER NSIATPVTLK PYFEADEAMK AVGGVGYLAQ LTGSGAGLIG ARDFAKQIYD
LALLRELAGV GRTLVENALD TSERVDPQAQ IEEAETALYR VAGGEAEMGS VKSFSQASLT
ALQAAERALN SGGHLSGITT GIASMNAKIG GMHNSDLMIL AGRPGMGKTS LATNIAYNAA
ERWRRDEEDG IPPEKNMGAK VAFFSLEMSA DQLATRVLAE QSGVSGEALR MGKISKEQFQ
QLSRAAQTLQ TLPLYIDDTP GLTIAGLRTR ARRLQRRHGI GFIIVDYLQL LQGSSRSGDN
RVQEISEISR GLKTLAKELN VPVMALSQLS RQVESREDKR PQLSDLRESG SIEQDADMVL
FVFREDYYVA AREPKRPVEG DDVKIHAAHE EWAAEMERVF GLAEVIVAKS RHGSTGKIRL
HFEAKTTKFS DLADDSMAYE DYE
|
|---|
| |