Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0764 |
Symbol | |
ID | 4080907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 771715 |
End bp | 772470 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638009123 |
Product | glycoside hydrolase family protein |
Protein accession | YP_615817 |
Protein GI | 103486256 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.295441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGC GGGCCATCGG GGGCGAGCAG AAAGCGGGGC GCAGCAACGG CTGGCGCGGC GCGGCTGCGC GCTTCCTCCG CCGTATCGGC GCCGCGGCGG TGCTCCTCCT CCTCGCGACG GGCCTCGCAC TCTGGTGGGC GGCGCGCTGG ACGCCCGATC GCGCCATCTA TCCCGTGCAG GGCGTCACGA TCGACGCCGA CAACGGCGAG GTCCATTGGG GATCGATCAA GGCCGCGGGC GCCGATTTCG CCTATATCGC CGCGACCGAT GGCACCGCAG GCGTCGACGC GCGGTTCGCG CGCAACCTGT CGCGCGCGCG CGATGCGGGG GTGCAGGCAG GCCCGATACA CCGCTACAGC CTCTGCCACC TCGCGACCGA CCAGGCCGCC AATTTCATCC GCCACGTCCC GCGCCGCGCC GACATGCTGC CGGCCGTGGT CTGGCTCGAT TATGACGACC GCTGCCCCGA CCGGCCGACG CGCGCGCTGC TCTTGTCCGA ACTCGCGACC TTCCTCGCGC AGATCGAGAC GCATATGGGC AAGCAGAGCC TGATCGCGCC GGGGCCGGCG TTCGAGGCCG ATTACCGCGT GACACGCGGC ATCGCGCGCA CGACCTGGCT GCGGCGCGAT TTCTTCGAGC CCGATTATGG CGCGCATCCC TGGACGATGT GGCAGGCGAA TGATTATGTC CGCCTGTCGG GCGCCGACGG CACCGTCGGC TGGAACGTGC TGCGCGCAGG TGGAGAGATG CGATGA
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Protein sequence | MKLRAIGGEQ KAGRSNGWRG AAARFLRRIG AAAVLLLLAT GLALWWAARW TPDRAIYPVQ GVTIDADNGE VHWGSIKAAG ADFAYIAATD GTAGVDARFA RNLSRARDAG VQAGPIHRYS LCHLATDQAA NFIRHVPRRA DMLPAVVWLD YDDRCPDRPT RALLLSELAT FLAQIETHMG KQSLIAPGPA FEADYRVTRG IARTTWLRRD FFEPDYGAHP WTMWQANDYV RLSGADGTVG WNVLRAGGEM R
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