Gene Sala_0760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0760 
Symbol 
ID4080903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp768488 
End bp769288 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content69% 
IMG OID638009119 
Producthypothetical protein 
Protein accessionYP_615813 
Protein GI103486252 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0974369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCT CTCCCGGCGC GCTCGACGCG CTGCTCGCGA CGCTGCGCAC CGAAGAGGGC 
GTGGCCAAGG CGCATATCGA CGAAGGCTGG ATGCAGGGCC GTACCGCCTA TGGCGGGATC
AGCTCGGCGG TCGCGCTCGC GGGCGCGATG GCGCTCCACC CGACCGAGGC ACCGCTGCGC
TATGCGCAGA TCAGCTTCGT CGGTCCCGTC GGCGGCGATT GTACGGTCGA GACGCGCGTG
CTGCGTCAGT CGAAATCGTC GCTGTTCATC GACGCCGGTG TGTCGAGCGA CATGGGGTTC
GGCACCGCGG CAGTCTTCGC CTTCTCCCCC GACCGGCCGA GCCATGTCGA CCATGACCGG
CTGACGATGC CGGACGCCCC CGCCCCCGAA ACGCTGGCGC CGGTGCCCGA ACATCATGCG
CGCCCTGCCT TCACCCGCCA TTTCGACATG CGCCCGACGA CGGGGCCGCG CTTTGGGTGG
AAAAGCGATG TGGGCGAATA TCTGACCTGG GTGCGCTTCG CCCAGGAACC GCAATGCCAC
CCCACGGTCG CGCTGCTCGC CATGGGCGAC GCACTGCCCC CCGCGGCGAT GGCGCTGTTC
AGCCAGTTCG GGCCGATCAG CTCGATGAAC TGGACGGTCA ACATGCTGAC TGCCGCGCCC
GCTACCGATG ACGGCTGGTG GCTGCTCTCG GCGAAGACCG GCTATGCGCG CCACGGCCTG
TCGGTGCAGG ACATGATGCT GTGGAACCGC GCGGGCCAGC CGATCCTCAG CGGCAGCCAG
GCGATCGCGA TCTACGTCTG A
 
Protein sequence
MTTSPGALDA LLATLRTEEG VAKAHIDEGW MQGRTAYGGI SSAVALAGAM ALHPTEAPLR 
YAQISFVGPV GGDCTVETRV LRQSKSSLFI DAGVSSDMGF GTAAVFAFSP DRPSHVDHDR
LTMPDAPAPE TLAPVPEHHA RPAFTRHFDM RPTTGPRFGW KSDVGEYLTW VRFAQEPQCH
PTVALLAMGD ALPPAAMALF SQFGPISSMN WTVNMLTAAP ATDDGWWLLS AKTGYARHGL
SVQDMMLWNR AGQPILSGSQ AIAIYV