Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0760 |
Symbol | |
ID | 4080903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 768488 |
End bp | 769288 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638009119 |
Product | hypothetical protein |
Protein accession | YP_615813 |
Protein GI | 103486252 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1946] Acyl-CoA thioesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0974369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCT CTCCCGGCGC GCTCGACGCG CTGCTCGCGA CGCTGCGCAC CGAAGAGGGC GTGGCCAAGG CGCATATCGA CGAAGGCTGG ATGCAGGGCC GTACCGCCTA TGGCGGGATC AGCTCGGCGG TCGCGCTCGC GGGCGCGATG GCGCTCCACC CGACCGAGGC ACCGCTGCGC TATGCGCAGA TCAGCTTCGT CGGTCCCGTC GGCGGCGATT GTACGGTCGA GACGCGCGTG CTGCGTCAGT CGAAATCGTC GCTGTTCATC GACGCCGGTG TGTCGAGCGA CATGGGGTTC GGCACCGCGG CAGTCTTCGC CTTCTCCCCC GACCGGCCGA GCCATGTCGA CCATGACCGG CTGACGATGC CGGACGCCCC CGCCCCCGAA ACGCTGGCGC CGGTGCCCGA ACATCATGCG CGCCCTGCCT TCACCCGCCA TTTCGACATG CGCCCGACGA CGGGGCCGCG CTTTGGGTGG AAAAGCGATG TGGGCGAATA TCTGACCTGG GTGCGCTTCG CCCAGGAACC GCAATGCCAC CCCACGGTCG CGCTGCTCGC CATGGGCGAC GCACTGCCCC CCGCGGCGAT GGCGCTGTTC AGCCAGTTCG GGCCGATCAG CTCGATGAAC TGGACGGTCA ACATGCTGAC TGCCGCGCCC GCTACCGATG ACGGCTGGTG GCTGCTCTCG GCGAAGACCG GCTATGCGCG CCACGGCCTG TCGGTGCAGG ACATGATGCT GTGGAACCGC GCGGGCCAGC CGATCCTCAG CGGCAGCCAG GCGATCGCGA TCTACGTCTG A
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Protein sequence | MTTSPGALDA LLATLRTEEG VAKAHIDEGW MQGRTAYGGI SSAVALAGAM ALHPTEAPLR YAQISFVGPV GGDCTVETRV LRQSKSSLFI DAGVSSDMGF GTAAVFAFSP DRPSHVDHDR LTMPDAPAPE TLAPVPEHHA RPAFTRHFDM RPTTGPRFGW KSDVGEYLTW VRFAQEPQCH PTVALLAMGD ALPPAAMALF SQFGPISSMN WTVNMLTAAP ATDDGWWLLS AKTGYARHGL SVQDMMLWNR AGQPILSGSQ AIAIYV
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