| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0745 |
|---|
| Symbol | |
|---|
| ID | 4081155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 752340 |
|---|
| End bp | 753260 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638009103 |
|---|
| Product | D-galactose 1-dehydrogenase |
|---|
| Protein accession | YP_615798 |
|---|
| Protein GI | 103486237 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCTCC GCATTGCGCT GATCGGCTTC GGCAAAATCG CGGAAGACCA GCATCTCCCG
GCCATCGCTG CCAACCCCGA TTTCGAACTC GCGGCGATCG TTTCGCTCAA CCGTCCCAGC
CATATTCGAT GTCCCGTCTT TTCCACGGTT GGCGACATGT TTGCGGGCCT GCCAGGGGGC
ATCGACGCCG TCGCCATTTG CACCCCGCCA GTTCCGCGCT TTGCAATTGC GTGCGAGGTC
ATCACTGCGG GTCTCCCCGT GCTGTTCGAA AAGCCGCCCA CCGCCACCCT GGGGGAACTC
GACTATCTGA TTGCGCTTGC CCGCTTGCGA AACGTTCCGA TCTTTACAGC TTGGCATTCG
CAATATGCAG CCGGCGTGCC GGTCGCCGCG CGGGCCCTGA AAGGGGAGGC CGTTACAAGT
CTTACAATGC TGTGGCGCGA AGATGTCCGC AAATATCATC CCGGACAGCA ATGGATATGG
CAGCCAGGAG GGTTTGGCGT GTTCGATCCC GCGATCAATG GTTTTTCGAT CCTCAACAAC
ATCCTGGACG AGCCGCTCCT GGTCAACCGG GTATCGATGC TGTTCCCGGC AAACCGGCAA
ACGCCCATTT CGGCCGAAGT TCTTTTCCAT GGAGACGATC GCAAAGCCAT ACTGGACTGG
CGTGGCGGGG ATGAAGATGA ATGGAAGATC CAGATTGAAA CGGCGTCGGG CAAGTCGGTT
CGCCTGATGG AAGGGGGCGC TCAACTCGAG ATCGACGGCG CGCCGCGAAG TTTGCCGCCG
CGCAGCGAAT ATCGCGCCAT CTATGAGGAT TTCGCCGACG TCGTGCGTCG CCGGTGCAGC
AAGATCGATC GGGATCCGCT GCGTATCGTT GCTGACTGCT TTCTGGCCGC CGAACGAAAT
GCGGGGGACG ATTTTGCCTG A
|
|---|
| Protein sequence | MTLRIALIGF GKIAEDQHLP AIAANPDFEL AAIVSLNRPS HIRCPVFSTV GDMFAGLPGG
IDAVAICTPP VPRFAIACEV ITAGLPVLFE KPPTATLGEL DYLIALARLR NVPIFTAWHS
QYAAGVPVAA RALKGEAVTS LTMLWREDVR KYHPGQQWIW QPGGFGVFDP AINGFSILNN
ILDEPLLVNR VSMLFPANRQ TPISAEVLFH GDDRKAILDW RGGDEDEWKI QIETASGKSV
RLMEGGAQLE IDGAPRSLPP RSEYRAIYED FADVVRRRCS KIDRDPLRIV ADCFLAAERN
AGDDFA
|
|---|
| |