| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0741 |
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| Symbol | |
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| ID | 4081151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 746639 |
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| End bp | 749395 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638009099 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_615794 |
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| Protein GI | 103486233 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0701962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTACA GGACAATCGC TCGCTGCACG GCATCGCTGG CAGTGATGTC TTTGTGTGCG
ACTGTCGCCT CGGCGCAGGA CGCCCCTCCC GTGCAGGATT CTGCCGACAG CGAAGGGGAC
GCTATCGTCG TCACCGGTTT CCGCGCTTCG CTTCAGTCGG CGCAGAGCAC AAAGCAACGC
TCCGACAAAA TTGTCGACTC GATCGTGGCC GAAGATATTG GCAAATTGCC GGATATCGCA
GTTTCTGACA CCGCCGCGCG CATTCCAGGT GTCCAGGTGG AGCGCCGGGG CGGCGAGGCC
AATCGCGTGC TCGTTCGCGG ACTTGACCGC TTCAACTACA CGACAACCTA TAATGGTCGC
GAGATCTTCA CCGCCGAAAC ACGGTCGGTC GCGCTGCAGG ATTTCCCGGC GGGCGGGATA
AGTGCGATCG ACGTTTTCAA GACATCGAGT GCCGAGCTTG TCGAGCCGGG CATCGCCGGT
TTGGTCAACG TGCGCTCACG ACGGCCTTTC GATTTCGCCG ACTCCGAAAT TGCAGGCTCG
GTATGGGGCG TATATCCGGA TAAGTCTCGC GATCTCGAGC CCAATGCCCA GCTGCTTCTT
TCAGATCGCT GGGACGTCGG CGAGGGCGAG ATCGGGGCTT TGATCAATTT CTCCTACACA
CGCATGCACT ATCGTGACTC GGTGCGGCGT CACGGCTTCT TCATTGCCGA CCTCGCCGGG
GCGCGTTCGC CTGACTGGCC TGAAATCCAG TATGCCGAAG CGGAGAGATG GCGACCCTCG
ATAAATGGCG CCCTCCAGTG GCGTCCCTCG CCCGACCTCG AAATCTATGT CGAAGGTCTT
TGGCAAGGCT TTCGCGAACG GGCGACCGAC CGGATGTGGG CACAGCCGCT CTGGGGCGGC
GCGTCTTACG AGAATATCGT CCTCGATGGT AACCAGATCA TCAGCGGTAC CGTCAATCGG
CCAACGGCAT GCTGTGGCGG CAATCAGACG TGGGGTTTCC AGGGCGCGAC CAAGCGCGAC
ACGAACACGT ACCAGTTCGC CGTCGGCGGT CGCTGGGATG TGGGGCCGCT GCGGATCACC
GCTGATGTCG CCCGCACCGA CAGTACATTC GATCTCCGGA CCGAAAGTGT TGATTACGAG
ATCAATACTA ATGATTACTC GGTCGACTGG TTCACCGGCA AGCCGGGTGG TTCCGGACTG
ACCTTCCAGG TTCGAGGGAT CGATCCAACC AATCCCGGTA TCTACAACTA CCGGGGTTTC
TACGAAGATC ATCTGACCGC AAGCGGTGAC GACTGGCAGG CACGGCTGGA TTTTCAGTAT
GAGCCGACCG GTATCAGTTT CATTCCCGCG CTCCACTGGG GCGTTCGCTT CGTCGACCGC
GACGCGTCCG CGCGGGCGGG CGACTTTTAC TGGAACCTGC GCGACCGCGG CATTCCGATT
AGCGCCGTAC CGCTCGATTA TGTGCTTCAG CCCCGCGGTT TCCGTGGTGA CAAGAATGCG
CCCTTCCCGG TCAGCTGGTT TGGCCCGACA TTTGCCAGCG TGCACGATAA CCTGATCGAA
CTTCGCCAGT TCAACATCGA CCTTACCGGC GCTGGTTCGG TTGACGGTCC CCCAATAGAT
GCTGGCAGAA CGTTCGACAT AAACGAAAAA TCCTACGCCG GTTATGTCAG TGCCAATTAC
GAACTCGCGC TGGGAGAAAC GACGATCGAC GGTCAGATCG GCCTGCGCGC CGTCCGCACC
GAAACGAAAA CCTCCGGCAC GCTTTTCACC ACAGCGGGGC CCGTCCCCGT CAACTTCAAA
AATGCCTATA CCGACTGGCT GCCGAGCGCC AACCTGCGGG TTCAATTTTC ACCCGAGGTG
CAGGCGCGCT TCGCCTTTAC GCAAACGCGC ACCCGGCCAA GCTTCGCGCA GCTCAATCCG
GCGCTCAGGC TTTCGCCCGC AACGCCTTGC GCCCCGGGCC AGACCGACTG CATTCGCACC
GGGTCGGGCG GGAACCCGTT CCTGAAACCG CTCGACTCCG ACAATTATGA CGCAAGCCTC
GAATATTATT TCTCGCGGAC CGGATTCGCC TCGATCGGCG TATTTCGCCG CGATATGCAG
GGCTTCATTG CCAATCGCGC CTTCGAATTT CCCGAGCCAG ACCCTGAAAC CGGCCGCACT
CTGGTCATTT CGGGACCGGT CAACACACGC AATGCGCGGA TCAAGGGTGT CGAGGCGCAG
ATTTCAGGCT TCTTCGATTT TCTGCCCGGC GCGCTGAGCG GATTGGGAGC GCAGGCGAAC
GTCACTTATC TCGACGCCAA GGCGGACTTC GGTTTCTTCT GTCCCACGAC CGCCAATGCG
GATTGCGTGG CAGGGCCGGG AGCGCCCAAT GCGGCCACAT TGCGGACACG AATCCCCGAT
GTGTCGAAAT GGACATATAA TCTCGTTGGC TTGTACGAGC GTGGCGGGCT CTCTGTGCGC
CTGGCCTATA ATTACCGCAG CAGCTTCCCC GAAGCGGATC GCGCCGAGCG CGATGGCTTC
TTCACGCTGC AAGGTCGAGG CAACTCGGTA TCGCGACTGG ATTTGTCGAG CAGCTACGCC
TTTACGGACA ATTTCACCGT ATTTTTCGAC TGGACCAATA TCCTCGACAA CCCATTCCAG
TCCGACATCG TTCGGATCAA TTATCCGGGT GGCATTCCAA GCGACCCGGA GATTTTTCCG
ATGGTAACCC GGTTTGAGGA GTCGGTATTG TCGGGTGGGG TCCGGTTTCG GTTCTGA
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| Protein sequence | MRYRTIARCT ASLAVMSLCA TVASAQDAPP VQDSADSEGD AIVVTGFRAS LQSAQSTKQR
SDKIVDSIVA EDIGKLPDIA VSDTAARIPG VQVERRGGEA NRVLVRGLDR FNYTTTYNGR
EIFTAETRSV ALQDFPAGGI SAIDVFKTSS AELVEPGIAG LVNVRSRRPF DFADSEIAGS
VWGVYPDKSR DLEPNAQLLL SDRWDVGEGE IGALINFSYT RMHYRDSVRR HGFFIADLAG
ARSPDWPEIQ YAEAERWRPS INGALQWRPS PDLEIYVEGL WQGFRERATD RMWAQPLWGG
ASYENIVLDG NQIISGTVNR PTACCGGNQT WGFQGATKRD TNTYQFAVGG RWDVGPLRIT
ADVARTDSTF DLRTESVDYE INTNDYSVDW FTGKPGGSGL TFQVRGIDPT NPGIYNYRGF
YEDHLTASGD DWQARLDFQY EPTGISFIPA LHWGVRFVDR DASARAGDFY WNLRDRGIPI
SAVPLDYVLQ PRGFRGDKNA PFPVSWFGPT FASVHDNLIE LRQFNIDLTG AGSVDGPPID
AGRTFDINEK SYAGYVSANY ELALGETTID GQIGLRAVRT ETKTSGTLFT TAGPVPVNFK
NAYTDWLPSA NLRVQFSPEV QARFAFTQTR TRPSFAQLNP ALRLSPATPC APGQTDCIRT
GSGGNPFLKP LDSDNYDASL EYYFSRTGFA SIGVFRRDMQ GFIANRAFEF PEPDPETGRT
LVISGPVNTR NARIKGVEAQ ISGFFDFLPG ALSGLGAQAN VTYLDAKADF GFFCPTTANA
DCVAGPGAPN AATLRTRIPD VSKWTYNLVG LYERGGLSVR LAYNYRSSFP EADRAERDGF
FTLQGRGNSV SRLDLSSSYA FTDNFTVFFD WTNILDNPFQ SDIVRINYPG GIPSDPEIFP
MVTRFEESVL SGGVRFRF
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