| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0693 |
|---|
| Symbol | |
|---|
| ID | 4081952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 700389 |
|---|
| End bp | 701075 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 638009052 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_615747 |
|---|
| Protein GI | 103486186 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCGG TCGGCTTCGG TCGCCACGCG GCGGACGAGC GGCTGCCGCG GCATCGCCAT
GCCCATGGCT ATATCGCGGT CGTGCTCGGC GGCGGATATG AAGAAGCGGG CGACGAGGGG
CGGTTTGCGG TGCGGCCGGG CATGGTCGTC GTCCACGGGT GCTGGACCGC GCATCTCGAC
CGCTTCGGCG CGCGTGGGGC GGAGGTGCTC AACCTGCCCT TAGTGCCGGG ACTGGCGCCC
GGTGTCGGCA CGATCGACGA TCCCGACACG GCGGCGCGGC TGGCCGAGCG CGACCCGCGC
GCCGCGGCGG CGTTCGTTGC GGAGTGGTTC TGCGCGAGCG ACGATCGACA CACCGACTGG
CCCGACCGGC TCGCCGCGGC GCTCGGCGCC GATCCCGACC TTGCGATCAC GCCATGGGCG
CGCGCCGTCG GCCTCGATCC GGCGTCGGTC AGCCGCGGTT TCGCGCGCGC CTATGGCACC
AGCCCCAAGC GCTTCCGCCT CGAAGCGCGA ACGCGCCGCG CCCTTGCCGC GCTGCCCGGC
TGGCGCGGTA CGCTCGCCGA TCTCGCGGCC GACCAGGGTT TCGCCGACCA GGCGCATCTC
GCTCGCGCGG TCGCGGCGAT GACCGGCCTT CCGCCCGTGC GCCTGCGGGC AAAGTCCGTT
CAAGCCAGCG GGGTGCCGCG CGGCTAG
|
|---|
| Protein sequence | MSAVGFGRHA ADERLPRHRH AHGYIAVVLG GGYEEAGDEG RFAVRPGMVV VHGCWTAHLD
RFGARGAEVL NLPLVPGLAP GVGTIDDPDT AARLAERDPR AAAAFVAEWF CASDDRHTDW
PDRLAAALGA DPDLAITPWA RAVGLDPASV SRGFARAYGT SPKRFRLEAR TRRALAALPG
WRGTLADLAA DQGFADQAHL ARAVAAMTGL PPVRLRAKSV QASGVPRG
|
|---|
| |