| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0607 |
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| Symbol | |
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| ID | 4082543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 617263 |
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| End bp | 618393 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638008966 |
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| Product | cell wall hydrolase, SleB |
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| Protein accession | YP_615661 |
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| Protein GI | 103486100 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.356113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCG AACTGACCCT GACCGCCCGC TCGACGTGGC GCGACCCGCC GCCCGAACGG
TCGGCGGGGC CGGGGCGCGC TTTCTGGGCG GCGATCGGGG GCGTTTCGGT CGTCGCCTGC
TTCGCCTTTC TGTTGTCGAG CGGGCAGTTT CGCGCGCCGT CGATCTTCGC CCCCTACAGC
GTGTCGGTGC CGGTCGATTT CAGGCCCTAT GACCCCGAAC GCTGGGCGAT CATGACCGCC
GGGGATTATG AGGCGGCGCT GAAGATCGAC CCCACGCTGC CCGACCCGCG CAGCATCGAC
TTTTCCGACG CCACCGCGCT GCCCCCCGCC GACCCCGCGG CGCTGCGCGA AGAGGCATTC
GCCGGACCGC CTGCCAGGCC CTATGTCTTT CGCGGGCTGA CCGCGCTCGA TCGCGAACGC
GCGCATTATT GCCTGACCGC CGCCATCTAT TACGAGGCGG CGTCCGAAAG CGACGACGGG
ATGCGCGGCG TCGCGCAGAC GATCATCAAC CGCGTCCGCC ATCCCAGCTT TCCGGGCACC
GTGTGCGGCG TCGTTTTCCA GGGATCGCAG CGCGCCGGGG TGTGCCAGTT CACCTTTGCC
TGCGACGGCG CGATGGCGCG CGCACCCGAA CGGCGGAACT GGCTGCGCGC GAGCCGCGTG
GCCTCGGCGG CGCTCGGCGG TCAGGTGTAT GCCAAGGTGG GGCTGGCCAC CCATTATCAT
ACGCAGGCGA TCTGGCCGCG CTGGGGCAAA AGCCTGGTGA TGACCAACAT CGTCGGCGCG
CACATCTTTC ACCGCTGGCG CGGGCGCTGG GGAATGCCCG ACGCCTTTCG CGCACCCTAT
CTGGGCCGCG AACCAGTGCC GGGCCCCTAT CTGCCGGTGG CCCAGCAGCT CGCGATCCTG
AAGGGTCAGG GCATTGCGCC CGGTGCCGGC CCGCTTCCCG CACTGACTGG CGCCGCAGCA
CCGCTCCCCG ATGCCGCGCC CGCGCCGCTG CTGCCCGGTG CGCTGGCCCC AGCACCCCCC
GGCGCCCCGG CCGCCGCAGC GCCCGCCGCG CCGAGCTATA CCGACCCCCG TCTCAACCAA
TCTGGACAGG TCCGCGAGGA GTTTTCAAAG AGCGGAGAGT GGAAACGCTG A
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| Protein sequence | MKPELTLTAR STWRDPPPER SAGPGRAFWA AIGGVSVVAC FAFLLSSGQF RAPSIFAPYS
VSVPVDFRPY DPERWAIMTA GDYEAALKID PTLPDPRSID FSDATALPPA DPAALREEAF
AGPPARPYVF RGLTALDRER AHYCLTAAIY YEAASESDDG MRGVAQTIIN RVRHPSFPGT
VCGVVFQGSQ RAGVCQFTFA CDGAMARAPE RRNWLRASRV ASAALGGQVY AKVGLATHYH
TQAIWPRWGK SLVMTNIVGA HIFHRWRGRW GMPDAFRAPY LGREPVPGPY LPVAQQLAIL
KGQGIAPGAG PLPALTGAAA PLPDAAPAPL LPGALAPAPP GAPAAAAPAA PSYTDPRLNQ
SGQVREEFSK SGEWKR
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