Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0575 |
Symbol | |
ID | 4082006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 587033 |
End bp | 588250 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 638008933 |
Product | peptidase M23B |
Protein accession | YP_615629 |
Protein GI | 103486068 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG4942] Membrane-bound metallopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.311118 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGCGCG GGCCCGCCGC GCTGGCGATC GTCGCCGCCT TCGCGGGCGG AACCTTCGCG CTGGCACAGG GCGACTTCTT CGACCCACAG GCCATCGCCA CGCGCGAACG GATGCAGCTC GTTGACGCCA GGCAGCAGTC GGCGGCGGCG ATGGCGCGCA GCGCCGCGCT GGAAAAACAG GCCGCCGCCG CGAACAGCGA GGCCGACCGG CTGAAAAAGC GCAGCGCCGC GCTCGCCGCG CGCATCCAGG CGGCCGAAGC CGACATCAGC GCCGGCGAGG CGCGCGTCGC GCTCGTCGCG CGCCGCCTGT CGGCGCAGCG CGCGCGGCTG GCCGAGCAGC AGCAGCCCCT GCTCGAACTC GCCGCGTCGC TCCAGCAACT CAGCCGCCAG CCACCCGTCA GCGTGCTCGC GCAGCCGGGA TCGCTCCGCG AGATGGTCCA CGCCCGCGCG GTGATCGACG CCGCGATGCC GGTGATCGCG CGGCGCACCG CCGGGGTCCG CCGCGAACTC ACTCTGCTCG ACACCGCGCG GCGGCAACAG GCGATCGCGC TCGACGCGCT GGCGGCAAGC AGGGCGCGGC TCGCCGCGCG CCGCGCCGCG CTGACGCGCC TCGAGAACGA GGGGCGGTTG CGCTCGCGCG ACCTGATGAG CAGCGCGCGG CTCGAGGCCG ACCGCGCGCT GGGGCTTGGC GAAAAGGCGC GCGACATCGT CGAATTGATG GATGCGCTCG AAGCCGACGG GCTGGTGCGT GCCGAACTGG CGGCGCTGGC AGGGCCGCTG CCGCGTCCGC GCGATCCCGA GGCGGGGAGC GTCGACCCTC TCGCCCCGCC CGCCACGCGC GAGGTCGGCC TCACCGCCAC CGCCTATCGC CTGCCGGTCG TCGGGCGCAT CGTCACCGGG CTGGGCGAGG TCAACGAAAG CGGGGTGCGG TCGCGCGGCA TCACCGTCGC GGCGCGACCG GGGGGGCAGG TCGTCGCCCC CGCGCCCGGT CGCGTGAGCT TTGCGGGCGA TTATCGGGGC TATGGCAAGA TCGTCATCAT CGACCATGGC GGCGGCTGGA TCTCGCTGCT CGCCGGGATG ATCGCGCTGT CGGTGGGGGT TGGCGATACG GTCGAGGCCG GGGCGCCGGT CGGGCGCGCC GGATCGGACG ACAGCCGCAT CACCGTCGAA CTGCGCCGTG CAGGCCGCCC GGTCGATATC GTCGCGATGA TCGGATAG
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Protein sequence | MRRGPAALAI VAAFAGGTFA LAQGDFFDPQ AIATRERMQL VDARQQSAAA MARSAALEKQ AAAANSEADR LKKRSAALAA RIQAAEADIS AGEARVALVA RRLSAQRARL AEQQQPLLEL AASLQQLSRQ PPVSVLAQPG SLREMVHARA VIDAAMPVIA RRTAGVRREL TLLDTARRQQ AIALDALAAS RARLAARRAA LTRLENEGRL RSRDLMSSAR LEADRALGLG EKARDIVELM DALEADGLVR AELAALAGPL PRPRDPEAGS VDPLAPPATR EVGLTATAYR LPVVGRIVTG LGEVNESGVR SRGITVAARP GGQVVAPAPG RVSFAGDYRG YGKIVIIDHG GGWISLLAGM IALSVGVGDT VEAGAPVGRA GSDDSRITVE LRRAGRPVDI VAMIG
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