Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0554 |
Symbol | |
ID | 4081444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 568678 |
End bp | 569649 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638008912 |
Product | ribosomal L11 methyltransferase |
Protein accession | YP_615608 |
Protein GI | 103486047 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2264] Ribosomal protein L11 methylase |
TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.125025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.11263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTGGA TCGTCTCCTT TCCCTGTACG CGCGCCGAGG CCGAGGCGCT GTCGGGCGAG ATTCCCGCGC TTGATGCGCT GGACGCGCCC CCGGTGGTGG TGACGCGCGA GATCGACGAG GATACGGGGC TGTGGCAGCT CGACGCCTAT CTGGATGACA AACCCGACGC GGCCCTGCTG GACCTGCTCC GCTCGCTCGT CCCGAGCGCC AGGGACGAAA TGCCGATCGT CGAGCGGCTG CCCGACGAGG ATTGGGTAAC GCTCAGTCAG CAGGGACTCG AACCCGTCCG GGCGGGCCGT TTCTTTGTTC ATACCAGCAG CTATTCGGGC CGCTTGCCGC CCGGCACCAC ACCCTTCCTG ATCGACGCGA GCCAGGCTTT CGGGACTGGC GGGCACGACA CAACGGCGGG CTGTCTTGCC ATGCTCGACC GGCTCGCCCG GCGCGGTGGA ACTCCACGCA ACATAGCGGA CATCGGCACC GGCACCGGCC TGCTCGCCTT TGCGGCGATG GCGCTGTGGC CGAGGGCGCG GGTAATCGCG TCGGACATCG ACCCCGCGAG CATCTTTGTC ACCCGCGACA ATGCCGCGGT CAACGGCGTG CCGCTGGGGC GCGGCGGTGG GCGGTTGGCC TTGGCGGTCG CGCCGGGGAC CGACCATCCG GCGATCCGCC GCCGTGCGCC CTATGATCTG GTCATCGCCA ACATTCTTGC GGGGCCGCTC ATCACCCTTG CTCCCGACAT CGCCGCCGCA ACGGCGCCCG GCGGCCATGC GATCCTGGCC GGACTGATCG CGCGGCAGAT GGAGCCGGTG CTGGCTGCCT ATCGTGCGCA GGGGTTCCGT CTGGCAGGAC GCGGCGGCAG CGCGGACTGG CCGTGCCTGC TATTGGTGAA GCGGCGGCGC TATGGCTGGC GCCGCAAGGA GCGCGCCTTT CACCGTTCGG ACCCGGCGGA CGCGAGTTTC GGGAACTGGT GA
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Protein sequence | MSWIVSFPCT RAEAEALSGE IPALDALDAP PVVVTREIDE DTGLWQLDAY LDDKPDAALL DLLRSLVPSA RDEMPIVERL PDEDWVTLSQ QGLEPVRAGR FFVHTSSYSG RLPPGTTPFL IDASQAFGTG GHDTTAGCLA MLDRLARRGG TPRNIADIGT GTGLLAFAAM ALWPRARVIA SDIDPASIFV TRDNAAVNGV PLGRGGGRLA LAVAPGTDHP AIRRRAPYDL VIANILAGPL ITLAPDIAAA TAPGGHAILA GLIARQMEPV LAAYRAQGFR LAGRGGSADW PCLLLVKRRR YGWRRKERAF HRSDPADASF GNW
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