Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0498 |
Symbol | |
ID | 4081388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 515862 |
End bp | 517142 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638008856 |
Product | hypothetical protein |
Protein accession | YP_615552 |
Protein GI | 103485991 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACGCA AACTTCTCGT TTTCGCCGTC GCGGCGACTC TTGCTCAGCC AGCCTTTGCT CAACCGTTCT GTCAAGCGGG CGCTTATCGC GGCGCCGACG GCGACTTTGT CGCGCTGGCA AAATCGACGG TCAATCCGGC GGGCGGGCTA CGCTATCTGT TCCGTGACGG GCGCCGCGGA TCGACGGGCG ATGCCGACGC GCCGCTCGAT TGCGCTCCCG ACGGCGTGCG CATTGGCAAG GGCGCCGAGG CGGAGACGTG GGCGCGCATC GCCCTTCGCG AAACCCCGGC GACCTTCGAC AGCGCGGGAT CCAAATTGTC GGGCATGTTG ATCGAACCGC CGGGCAGCGA TCCGCAGCGG CCGCTGGTGG TGATGGTCCA TGGCTCCGAA CGCACGTCGC CGATCGGCGG CATCTATGGC TATGCGATGG CGGCGCAAGG TCTGTCGGTG TTCGTCTATG ATAAACGCGG CACCGGCGCA TCGGAGGGCG AATATACGCA GAACTTCGAA TTGCTCGCGC GCGACGCCGC TGCGGCACTC GGGCAGGCGC GCGCGATGCT GCCCGGACAT GCCGGGAGGG CGGGCTTTTT CGGAGGCAGC CAGGGCGGGT GGGTCGCTCC GCTCGCCGCG ACGCTGACCC CCGCCGATTT TGTCGCGGTC GGTTTCGGCC TCGTCGCCTC GCCGATCGAG GAGGACCGCG AGCAGATGAT CTCCGAAGTG CGCGCGGCGG GGCTGGGCGC CGATGCCGAA GCGCTCGTTA ACCGCCTGTC GGCAGCAACG GCCAGGCTGC TGCTGTCGAA CTTCAAGGAT GGTTATGTCG AACTCGACGC CGCGCGCGCC GCGCTCGCGG ACAAGCCGTG GGCCACGCAG ATACGGGGCG AGCACAGCGG GATGATGTTG CGGATGTCCA ATGCTGAGCT GCGCCGGATC GGGCGGGCGC GCTTCGACAA TCTGGAACTG ATCTGGGATT ATGACGCGGT GGCGGCGCTG CGCCGGCTTC GCACGCCGCT CTTGTGGGTG CTCGCGGGCG AGGATCGGGA AGCCCCGATC GAAACGACAC GCGCCGCGCT GGCCGAATTG CGGGCGGCAG GGCAACCGAT CGACGTCTAT CTGTTTCCCG GCACCGACCA TGGCATGATC GAGTTCACGA CCGGCCCCGA CGGCAAGCGG TCCTACACGC GCATCACCGA CGGCTATCTG AAGCTGCTTG GCGACTGGAT GAAGGGCGAG GCGCGCGGCA CTTACGGCCG CGCCGAGACG CTGACGCCTA CCCCGCGCTG A
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Protein sequence | MIRKLLVFAV AATLAQPAFA QPFCQAGAYR GADGDFVALA KSTVNPAGGL RYLFRDGRRG STGDADAPLD CAPDGVRIGK GAEAETWARI ALRETPATFD SAGSKLSGML IEPPGSDPQR PLVVMVHGSE RTSPIGGIYG YAMAAQGLSV FVYDKRGTGA SEGEYTQNFE LLARDAAAAL GQARAMLPGH AGRAGFFGGS QGGWVAPLAA TLTPADFVAV GFGLVASPIE EDREQMISEV RAAGLGADAE ALVNRLSAAT ARLLLSNFKD GYVELDAARA ALADKPWATQ IRGEHSGMML RMSNAELRRI GRARFDNLEL IWDYDAVAAL RRLRTPLLWV LAGEDREAPI ETTRAALAEL RAAGQPIDVY LFPGTDHGMI EFTTGPDGKR SYTRITDGYL KLLGDWMKGE ARGTYGRAET LTPTPR
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