Gene Sala_0497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0497 
Symbol 
ID4081387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp514856 
End bp515815 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content67% 
IMG OID638008855 
Producthypothetical protein 
Protein accessionYP_615551 
Protein GI103485990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.855711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG CGCCGACGAC GCTGCTCAGC CCGCGCGTCC TGTTGCCCTT TCTTCTGGTG 
ACGCTGATCT GGGGGTCGAC GTGGATCGTC ATCAAGGGAC AGCTCGGCGT CGTGCCGCCC
AGCTGGTCGG TGACCTATCG CTTCGCCATC GCCGCCGCGG CGATGTTCGC CTTTGCGCTC
ATCCGCGGCG AGCGGCTGCG GCTCGACAAG CGCGCGATGC TCTTCGCCGC GGCACTTGGG
GTCGCGCAAT TCGCCCTGAA CTTCAACTTC GTCTACCGGG CGGAGCAGCA TATCACGTCG
GGCCTTGTCG CGGTGCTGTT CGCGCTGCTG ATCGTTCCCA ATACGTTGAT GGGACGCGCT
TTCCTCAAGA CACCGCTGGA GGGGCGCTTT CTGCTCGGCG CGGGGATCGC GATCGTCGGC
GTGGGCCTGA TGATCCTGCA CGAATATCGC GCCGCGGCGC TGGGCGCGGG CGAGGTGCTG
CTCGGCACCG CGCTGACGCT CGCTGGCGTG ATGAGCGCCT CGATCGCCAA TGTCATGCAG
GGCACCGCGA TCGCGCGCGC GCAATCAATG GTCGTGATGA TCGGCTGGGC GATGCTGTTC
GGCGCGCTCG CCGACGGCGC CTGGGCGTGG ATCACCACCG GCCCGCCGGT GGTCGAGCCG
ACGGCGGTGT ATCTGGGCGG CGTTCTCTAT CTGGGCGTCG TCGCCAGCGC CGTGACCTTC
CCCCTCTACT TCAACGTCAT CCGTGCGGTC GGGCCGGGGC AGGCGGCGTG GTCGAGCGTG
CTCATCCCGA TCATCGCGAT GGGCTTTTCG ACGGCGTTCG AGGATTATCG CTGGGCGATG
CTGTCGGTCG CGGGCGGTAT CGTCGCGCTG ATCGGGCTGG TGATCGCGGT CGCCAGGCGT
CCCGAGCGTC CGTCGGTCAG CGGCAATATG GTGTCTTTGC CGGTCGATTC CGACGGTTGA
 
Protein sequence
MSAAPTTLLS PRVLLPFLLV TLIWGSTWIV IKGQLGVVPP SWSVTYRFAI AAAAMFAFAL 
IRGERLRLDK RAMLFAAALG VAQFALNFNF VYRAEQHITS GLVAVLFALL IVPNTLMGRA
FLKTPLEGRF LLGAGIAIVG VGLMILHEYR AAALGAGEVL LGTALTLAGV MSASIANVMQ
GTAIARAQSM VVMIGWAMLF GALADGAWAW ITTGPPVVEP TAVYLGGVLY LGVVASAVTF
PLYFNVIRAV GPGQAAWSSV LIPIIAMGFS TAFEDYRWAM LSVAGGIVAL IGLVIAVARR
PERPSVSGNM VSLPVDSDG