| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0483 |
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| Symbol | |
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| ID | 4080531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 499052 |
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| End bp | 500344 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638008841 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_615537 |
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| Protein GI | 103485976 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.495163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGC GCGGCAAACC CAAGACGAAT AGCAAAAAGA TCGGCGACCG GGAGCTCAGC
CCCGCGACGC TGATGATGGG GCTCGGCTAT GATCCCGTGC TGTCCGAAGG CTCGCTCAAA
CCCCCGATCT TCCTCACCTC GACCTTCGCC TTTGAAAGCG CGGCGGCGGG CAAACGCTTC
TTCGAACATA TCACCGGCAA GCGCGAAGGC CCCGCCGATG GCCTCGTCTA TTCGCGCTTC
AACGGTCCGA ATCAGGAAAT CCTCGAAGAC CGGCTTGCGG TGTGGGACGG CGCCGACGAC
AGCCTCGTCT TTTCGAGCGG CATGTCGGCG ATCGCCACCC TGCTCCTCGC GCTGGTCGGC
CAGAATGACG TCATCGTCCA TTCGGGTCCG CTCTATGCCG CCACCGAAAC GCTGATCGCG
CGTATCCTGT CGCGCTTCGG CGTGAGCTTC GTCGACTTTC CGGCGGGCGC ATCGCGTGAC
GACATCGACG TCATTCTTGC GCGCGCGCAG GCGCTCGCCA GCCAGAAGGG CGGCAAGGTC
GCGCTCGTCT ATCTCGAAAG CCCGGCGAAC CCGACCAACG CGCTGGTCGA TGTCGAGGCC
GTCCGCGCTG CGCGCGACAC CGCTTTTCCG GGCGAGCAAA AGCCCGCGAT CGCCATCGAC
AACACCTTCC TCGGCCCACT GTGGCAGCAG CCGCTGAAAC AGGGCGCCGA ACTCGTCATC
TACAGCCTCA CCAAATATGC CGGCGGCCAT TCGGACCTCG TCGCGGGCGG CGTGTCGGGC
GACCAGCGGT TGCTCGACAT CATCCGCCCG ATGCGCAACA CGATCGGTAC GATCTGTGAC
CCGAATACCG CTTGGATGCT GCTGCGCAGC CTCGAAACGC TCGAACTGCG CATGCGCCGC
GCGGGCGAAA ATGCGCTGAA GGTCTGCACC TTCCTTCGCG ATCATCCGAA AGTCGAGGGG
CTCGGCTATC TCGGCTTCAT CAGCGATGCG CGGCAGAAGG ATATTTTCGA CCGCCACTGC
ACCGGCGCCG GATCGACCTT CTCGCTCTTC ATCAAGGGCG GCGAGGCCGA GAGCTTCCGT
TTCCTCGACG CCTTGCAGAT CGCCAAGCTC GCGGTCAGCC TGGGGGGCAC GGAAACGCTC
GCCAGCCATC CCGCCGCAAT GACGCACCTG TCGGTGCCCG ACGAACGCAA AAAAGCGCTC
GGCATCACCG ACAATCTGGT GCGCGTGTCG ATCGGCATCG AAGACCCCGA CGATCTGATC
GCCGACTTCG CGCAGGCGCT GGACGCGGTT TGA
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| Protein sequence | MAMRGKPKTN SKKIGDRELS PATLMMGLGY DPVLSEGSLK PPIFLTSTFA FESAAAGKRF
FEHITGKREG PADGLVYSRF NGPNQEILED RLAVWDGADD SLVFSSGMSA IATLLLALVG
QNDVIVHSGP LYAATETLIA RILSRFGVSF VDFPAGASRD DIDVILARAQ ALASQKGGKV
ALVYLESPAN PTNALVDVEA VRAARDTAFP GEQKPAIAID NTFLGPLWQQ PLKQGAELVI
YSLTKYAGGH SDLVAGGVSG DQRLLDIIRP MRNTIGTICD PNTAWMLLRS LETLELRMRR
AGENALKVCT FLRDHPKVEG LGYLGFISDA RQKDIFDRHC TGAGSTFSLF IKGGEAESFR
FLDALQIAKL AVSLGGTETL ASHPAAMTHL SVPDERKKAL GITDNLVRVS IGIEDPDDLI
ADFAQALDAV
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