Gene Sala_0470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0470 
Symbol 
ID4080518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp482855 
End bp483127 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content65% 
IMG OID638008828 
Producttransglycosylase-associated protein 
Protein accessionYP_615524 
Protein GI103485963 
COG category[S] Function unknown 
COG ID[COG2261] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACCT GGATTATCGC AATCGTCATG GGCGGCATCA TCGGCTGGCT GGCCAGCATC 
GTGATGCGCA CCGACGCCCA GCAGGGCATC TTCCTCAACA TCGTCGTCGG CTGCGTCGGT
TCGATCCTCG GCCGCTTCCT GTTCGGCCGC TTCCTTGGCG GCGGCCACCT GCGCGGCGAC
GCATTCGATC CGATGACCCT GCTCACCGCT TTTATCGGCG CGGTGATCCT GCTTGCGATC
GTCAACCTGG TCCGGCGCGG CCGCGTGCGC TGA
 
Protein sequence
MLTWIIAIVM GGIIGWLASI VMRTDAQQGI FLNIVVGCVG SILGRFLFGR FLGGGHLRGD 
AFDPMTLLTA FIGAVILLAI VNLVRRGRVR