Gene Sala_0469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0469 
Symbol 
ID4080517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp482465 
End bp482731 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content61% 
IMG OID638008827 
Producttransglycosylase-associated protein 
Protein accessionYP_615523 
Protein GI103485962 
COG category[S] Function unknown 
COG ID[COG2261] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGGTT TGATCGTTAC GTTGATCGTC GGCGGTATCA TCGGTTGGCT GGCGAGCATC 
GTCATGCGGA CCGACGCGCA GCAGGGCATT ATCCTCAACA TCGTCGTCGG CGTCGTCGGC
GCCTTTCTCG GCAATTTCCT CGGCAGCTTT TTCGGCATGG GGGCCAGCCT CGACAGTTTC
AGCCCGATCG GGCTGCTCTG GGCGTTTATC GGTGCGATCG TCCTCCTTGG CGTCATCAAC
CTGATTCGCC GCGGCAGCGT GCGCTGA
 
Protein sequence
MVGLIVTLIV GGIIGWLASI VMRTDAQQGI ILNIVVGVVG AFLGNFLGSF FGMGASLDSF 
SPIGLLWAFI GAIVLLGVIN LIRRGSVR