Gene Sala_0451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0451 
Symbol 
ID4080940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp462047 
End bp462814 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content66% 
IMG OID638008809 
Productglutamine cyclotransferase 
Protein accessionYP_615505 
Protein GI103485944 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3823] Glutamine cyclotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0267078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.572898 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTCG TCCTCGCTCT TGCCCTGCTC GCCGACTCCC CGGCTGCGAC GCCAGCCCCG 
CCGCCGCGGG TCGAACGCTG CGGCTACCGC ATCGTCCAAT CCTTTCCGCA CGACCCGTCA
TCCTTCACCC AGGGCCTCTT CTGGCACGAT GGGCATCTTT ACGAAGCGAC AGGGCAGTAC
GGGCAATCGC GTGTCGCGCG GCTCGACCTC AAGACCGGCA AGGCGCTCGT CGAAACGCCA
TTGCCATCCG ACCAGTTCGG CGAAGGCATC ACCCGCTGGG GCGACCAGAT CATTGGTGTG
ACGTGGAAGA ACGGAATTGG CCACCGCTGG CGGATCAGGG ATCTGAAACC GCTCGGCACC
TTCCGCTATG CCGGCGAGGG GTGGGGAGTG ACGATGGTCG GCAAGGATCT GGTGCTCAGC
GACGGCACGC CGCAGCTGCG CTTTCTGGAC CCGGCGACCA TGGTCGAACG GCGCCGCGTC
ACCGTGCGCT TCGCCGGGCG CCCGGTGGCG ATGATCAACG AGCTCGAAAC GATCGACGGC
CGGATCTGGG CGAATGTCTG GATGACCGAC TTCATCGTCC AGATCGACCC CGCGACCGGC
GACGTCGCCG CGATCATCGA CCTGTCGGGC CTGCACGCCG ACGCGGGGGC GCGGGGCACC
GACGGCGTGC TCAACGGCAT CGCCTGGGAT GCAAATGCGA AGCGGCTGTT TGTCACCGGC
AAATACTGGC CGAAGCTCTA CGAAATAGCG CTGGCGAATT GCCGCTAG
 
Protein sequence
MPFVLALALL ADSPAATPAP PPRVERCGYR IVQSFPHDPS SFTQGLFWHD GHLYEATGQY 
GQSRVARLDL KTGKALVETP LPSDQFGEGI TRWGDQIIGV TWKNGIGHRW RIRDLKPLGT
FRYAGEGWGV TMVGKDLVLS DGTPQLRFLD PATMVERRRV TVRFAGRPVA MINELETIDG
RIWANVWMTD FIVQIDPATG DVAAIIDLSG LHADAGARGT DGVLNGIAWD ANAKRLFVTG
KYWPKLYEIA LANCR