Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0446 |
Symbol | |
ID | 4082994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 456968 |
End bp | 457726 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638008804 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_615500 |
Protein GI | 103485939 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.352973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.813784 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACCG CCAAGCTCTT TCTGCACGGT GTGCCCGACA GCCCGGCGAT CTGGCGCCCT CTGCTCGCCG CGCTCGATCT CGGCGGCACG CCCGTCGCGG TTCCGGCGCT GCCCGGTTTC ACCGCACCGC TGCCCGCGGG TTTTGCCGCG ACGAAGGAGG TCTATGCCGA CTGGGCGGTG AAGCAGGCCG AGGCACTGTT CGCGGCGCAT GGCCCGATCG ACATCGTCGG GCACGACTGG GGGGCGCTGA TCGCGCAGCG CGTCGCGATG CTGCGACCCG ACCTCATCCG CAGCTGGGCG ATTTCGAACG CGGTGATCGA GTCCGACTAT CGCGGCCACC GCATCGCGCG CATCTGGAAC ACGCCGATCC TCGGCGAACT CTTCATGGCG CTGAGCAGGG CGGACAAGCT CGCCGCGGCG CTTGCGGCGC AGGGGATGCC TGCCGACATC GCGGCGGAAG AGGCCGCGCA GTGGAAGAAC AGGGACAAGC GCCGCGCGAT CCTCAAACTC TATCGGTCGG CCAAGGGGCT GAGCTTTGCG CAGGACTGGG CGCTCGACAT TCCGAAGCTG CCTGCGCGGG GCGCGCTGAT CTGGGGCGCC GGCGATCCCT ATGTCGAGCT GGCGGTCGCA CAGCGTTATG CCGCGGCGAC AGGCACGCCG CTTACGGTCA TCGACGGCGC CGGCCATTGG GCGATCGCCG AACGGCCGGG GGCGGTCGCC GCCGCGCTGC GCGCCTTTTG GGACGGCACC GCAATTTGA
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Protein sequence | MTTAKLFLHG VPDSPAIWRP LLAALDLGGT PVAVPALPGF TAPLPAGFAA TKEVYADWAV KQAEALFAAH GPIDIVGHDW GALIAQRVAM LRPDLIRSWA ISNAVIESDY RGHRIARIWN TPILGELFMA LSRADKLAAA LAAQGMPADI AAEEAAQWKN RDKRRAILKL YRSAKGLSFA QDWALDIPKL PARGALIWGA GDPYVELAVA QRYAAATGTP LTVIDGAGHW AIAERPGAVA AALRAFWDGT AI
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