Gene Sala_0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0446 
Symbol 
ID4082994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp456968 
End bp457726 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content70% 
IMG OID638008804 
Productalpha/beta hydrolase fold 
Protein accessionYP_615500 
Protein GI103485939 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.352973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.813784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCG CCAAGCTCTT TCTGCACGGT GTGCCCGACA GCCCGGCGAT CTGGCGCCCT 
CTGCTCGCCG CGCTCGATCT CGGCGGCACG CCCGTCGCGG TTCCGGCGCT GCCCGGTTTC
ACCGCACCGC TGCCCGCGGG TTTTGCCGCG ACGAAGGAGG TCTATGCCGA CTGGGCGGTG
AAGCAGGCCG AGGCACTGTT CGCGGCGCAT GGCCCGATCG ACATCGTCGG GCACGACTGG
GGGGCGCTGA TCGCGCAGCG CGTCGCGATG CTGCGACCCG ACCTCATCCG CAGCTGGGCG
ATTTCGAACG CGGTGATCGA GTCCGACTAT CGCGGCCACC GCATCGCGCG CATCTGGAAC
ACGCCGATCC TCGGCGAACT CTTCATGGCG CTGAGCAGGG CGGACAAGCT CGCCGCGGCG
CTTGCGGCGC AGGGGATGCC TGCCGACATC GCGGCGGAAG AGGCCGCGCA GTGGAAGAAC
AGGGACAAGC GCCGCGCGAT CCTCAAACTC TATCGGTCGG CCAAGGGGCT GAGCTTTGCG
CAGGACTGGG CGCTCGACAT TCCGAAGCTG CCTGCGCGGG GCGCGCTGAT CTGGGGCGCC
GGCGATCCCT ATGTCGAGCT GGCGGTCGCA CAGCGTTATG CCGCGGCGAC AGGCACGCCG
CTTACGGTCA TCGACGGCGC CGGCCATTGG GCGATCGCCG AACGGCCGGG GGCGGTCGCC
GCCGCGCTGC GCGCCTTTTG GGACGGCACC GCAATTTGA
 
Protein sequence
MTTAKLFLHG VPDSPAIWRP LLAALDLGGT PVAVPALPGF TAPLPAGFAA TKEVYADWAV 
KQAEALFAAH GPIDIVGHDW GALIAQRVAM LRPDLIRSWA ISNAVIESDY RGHRIARIWN
TPILGELFMA LSRADKLAAA LAAQGMPADI AAEEAAQWKN RDKRRAILKL YRSAKGLSFA
QDWALDIPKL PARGALIWGA GDPYVELAVA QRYAAATGTP LTVIDGAGHW AIAERPGAVA
AALRAFWDGT AI