| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0412 |
|---|
| Symbol | |
|---|
| ID | 4082364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 421590 |
|---|
| End bp | 422132 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638008770 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_615467 |
|---|
| Protein GI | 103485906 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.763317 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.777331 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGAG GCCATAATCG TCCGCCGCGC CTATCGAAGC AGCCCGGCAC GAATACTATT
TCGGCCGATG TTCCGATGGC AAAGATCTAC CAGGAACCGC GCTCCACGCT TCAGGGCGGG
CACCGCCCGC AACCGTGGTA CCTCGAGTTC GAGGCGAGAA GACCTTTGGG CCGCGACGTC
TTCACGGGCT GGATCACCAA TGATGATCCA TATCGCCATA TCCGTGTTCA GTTTCCTGAC
CGGGACAGCG CTATCGCATT CGCCGAGCGA CAGGGGTGGG AATACAGGGT CATCCACAAT
TCGGAGTCGC GGCATCTCAG TTCTAAGATC GACCAACTCT ATCGTGGCTC TGATGCGCCC
GGGAACTGGC CGATACGATG GTCAGGAGAA GGCAAACAGA TTTCCCAAAA CCGGCTGTAT
CGAGGTGCGC AAGCCGGCGA GCGGGCTGAG CGCGAGAAGG AGTTCGACCC GGTGGATGAA
GCGCTGCTCG AAAGCTTTCC AGCCTCCGAT CCGCCGGCAT TTACGGGCGC AACAATTGGC
TAG
|
|---|
| Protein sequence | MHRGHNRPPR LSKQPGTNTI SADVPMAKIY QEPRSTLQGG HRPQPWYLEF EARRPLGRDV
FTGWITNDDP YRHIRVQFPD RDSAIAFAER QGWEYRVIHN SESRHLSSKI DQLYRGSDAP
GNWPIRWSGE GKQISQNRLY RGAQAGERAE REKEFDPVDE ALLESFPASD PPAFTGATIG
|
|---|
| |