Gene Sala_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0397 
Symbol 
ID4081716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp407422 
End bp407781 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content66% 
IMG OID638008755 
Producttransposase IS3/IS911 
Protein accessionYP_615452 
Protein GI103485891 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.541296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.262239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGGGA TCACGGTATT CGGCGGCCCT GAACGTCGGC GACGCTGGAG CGACGAGGAA 
CGGCGACAAA TTCTGGAAGA TGCGTTTGCG CCCGGCGCGT GTGTCGCGCA GGTCGCCCGG
CACCATGATG TCTCGACGGC GCTGATCTAC ACCTGGCGCC GCAAGCTGTG CGCGGTGGCG
GCGGAATTGC CGTGCGAAGA GGGCTTCGTC GAAGCGATAG TGATCGAGGA TCAGGACACC
GAGGCGAGCA CGACGCAGCC GGCGATCGTT GTCGATCTTC CCCGCGGGGG TCGTGTCAGC
GTGTTCAGTT CGGCACCGCC AGCGGTGGCC GCGGCGATCA TGAAGGTGCT GATCCGGTGA
 
Protein sequence
MGGITVFGGP ERRRRWSDEE RRQILEDAFA PGACVAQVAR HHDVSTALIY TWRRKLCAVA 
AELPCEEGFV EAIVIEDQDT EASTTQPAIV VDLPRGGRVS VFSSAPPAVA AAIMKVLIR