| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0396 |
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| Symbol | |
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| ID | 4081715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 406261 |
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| End bp | 407373 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638008754 |
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| Product | transposase IS116/IS110/IS902 |
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| Protein accession | YP_615451 |
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| Protein GI | 103485890 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.29591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGG CGGGATTGTT CGGGTTATCG GAGCATCTGA AGCGGCTTTC GGCGCATGGC
GATCCGCTTG AAGTGCTGGC GAGGGTTGTC GATTTCGAGG CGTTCCGGCC GGTGCTGGAC
GTGTCGCTGG CCTATTCGGA CGGGGCGAAG GGCGGGTGGC CACCCTACGA TCCGGTGACG
ATGCTCAAGG TGCTGGTGCT GGCGGCGCAA AACAACGTGG CCGACGGGCG TATGGAGTAT
CTGATCCGCG ACCGGCTGAG CTGGCTGCGC TTTTTGGGCT TCGACCTCGG CGCGCCGACG
CCCGACGCCA ACACCATGCG GCTGTGCCGC GAACGGCTGA CCCAGGCCGG TGCCTTGGAC
ATGCTGTTCG CCGACTTTGA CCCGTGGATC GCGCTGGGCT TGCGCGAGTT GGGCGTTGCC
ATCGCCTGCA TCGACGCGCG TCAGGCGCAT CAGAGCTTGA AGGCGATGAA GGCCAACAAG
ACCGATCTGC ACGATGCGGC CGCGCTTGCC CAGCTGGCGC GTACCGGCTT CTACAAGGAC
ATGCATGTCA AGTCGCCGGC CGCGCACGGA GTGCGTTCGG TCATCACCGC CCGCGGCCAT
CTGGTCGAAG CACGCGTCCG GCTCGACAAC ACGATCCGCG GCCTCTGCGC CACCTTCGGG
ATCAGGCTCG GCGCGGGCCA GGGCGAGCGG TTCCTCGCGC GAATGCGAGT GGCTGCTTCT
GTCCCCGGCC TCTGCGAAGC GGTGGCGTCG CTCCTTCGGG CCCGCGAGCG CCTCGTGGAG
GAGATCGGGC AGATGGATCG CCAGCTCAAA GCGATCAGCC TGGCTTCTCT GGCCAGCCAG
GCCCTGATGA GCATCCCTGG CGTGGGTGTG CAGACCTCCG CTGCGTTCGC CGCCGCTGTT
GATGATGCCA GCCGGTTCAA GCGATCGCGA ACGGCTAGTG CGTACTTTGG CCTGGTTCCA
CGCCGACACC AATCGGGAGA GCTCGACTGG ACAGGACGCA TTACCAAACA AGGCGACGGG
ACGGTCCGCA AGCTCCTCTA CGAAGCGGCC AACTCGATCT TGACGCGCAC ACGCGGTACG
CCTCCGATGA CGGCCGCCTT GCCGGGCTCG TGA
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| Protein sequence | MPQAGLFGLS EHLKRLSAHG DPLEVLARVV DFEAFRPVLD VSLAYSDGAK GGWPPYDPVT
MLKVLVLAAQ NNVADGRMEY LIRDRLSWLR FLGFDLGAPT PDANTMRLCR ERLTQAGALD
MLFADFDPWI ALGLRELGVA IACIDARQAH QSLKAMKANK TDLHDAAALA QLARTGFYKD
MHVKSPAAHG VRSVITARGH LVEARVRLDN TIRGLCATFG IRLGAGQGER FLARMRVAAS
VPGLCEAVAS LLRARERLVE EIGQMDRQLK AISLASLASQ ALMSIPGVGV QTSAAFAAAV
DDASRFKRSR TASAYFGLVP RRHQSGELDW TGRITKQGDG TVRKLLYEAA NSILTRTRGT
PPMTAALPGS
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