Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0390 |
Symbol | |
ID | 4081977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 402828 |
End bp | 403220 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638008749 |
Product | heat shock protein Hsp20 |
Protein accession | YP_615446 |
Protein GI | 103485885 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.833766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.703561 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACG ACATGGAAAC GACGACCAAT GAGAAATTGG CGCAGCAGGC GGAGCAAGCA CAGCCAGTCC AGATGCCCTT GACCGACATC GTCGAAACCT CTGACGGAGC AATTCTCCTC ATCGAACTGC CCGGATGCAG CTCAGACGAT CTGGACATCG AGCTTGCGAA CGGCGTATTG ACAGTCGCGG CAAGGCCTTC GGTTTCGATG CCCCAAGAGG AGGAATTGCA GCACATCGAA TTTGTTTCAA CGGCTTATGA GCGCTCTTTC CAGGTCTCGA AAGATTTCGA TCCCGATAAA ACCGATGCGT CGATGCGCGA CGGCGTACTT ACCTTACGCC TTCATCGCTC TGAGAAACTG GCGCCCCGGA AGATTTCGGT GAAGGCAGGA TAA
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Protein sequence | MSNDMETTTN EKLAQQAEQA QPVQMPLTDI VETSDGAILL IELPGCSSDD LDIELANGVL TVAARPSVSM PQEEELQHIE FVSTAYERSF QVSKDFDPDK TDASMRDGVL TLRLHRSEKL APRKISVKAG
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