Gene Sala_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0390 
Symbol 
ID4081977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp402828 
End bp403220 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content54% 
IMG OID638008749 
Productheat shock protein Hsp20 
Protein accessionYP_615446 
Protein GI103485885 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.833766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.703561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACG ACATGGAAAC GACGACCAAT GAGAAATTGG CGCAGCAGGC GGAGCAAGCA 
CAGCCAGTCC AGATGCCCTT GACCGACATC GTCGAAACCT CTGACGGAGC AATTCTCCTC
ATCGAACTGC CCGGATGCAG CTCAGACGAT CTGGACATCG AGCTTGCGAA CGGCGTATTG
ACAGTCGCGG CAAGGCCTTC GGTTTCGATG CCCCAAGAGG AGGAATTGCA GCACATCGAA
TTTGTTTCAA CGGCTTATGA GCGCTCTTTC CAGGTCTCGA AAGATTTCGA TCCCGATAAA
ACCGATGCGT CGATGCGCGA CGGCGTACTT ACCTTACGCC TTCATCGCTC TGAGAAACTG
GCGCCCCGGA AGATTTCGGT GAAGGCAGGA TAA
 
Protein sequence
MSNDMETTTN EKLAQQAEQA QPVQMPLTDI VETSDGAILL IELPGCSSDD LDIELANGVL 
TVAARPSVSM PQEEELQHIE FVSTAYERSF QVSKDFDPDK TDASMRDGVL TLRLHRSEKL
APRKISVKAG