| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0386 |
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| Symbol | |
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| ID | 4081973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 398363 |
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| End bp | 399766 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638008745 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_615442 |
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| Protein GI | 103485881 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.754821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTTT CAATCGCGGT GATCGCTGCG ATTGCCACGG CCAGCCACGC GATCATCCAC
AAGCGCGACC CGCGATCGGC GACCATCTGG CTGCTAGTGG TTGCTCTTGT CCCTCTAGGC
GGCTCACTTT GCTACCTTTT ATTTGGGATA AATCGGGTTA ACCGCAAAGC AATGCGGCTA
CGCGCGGCGC GCCCAGCGAA AAGCGAACTT TCCAATCTAG GTTCGGCGGG CATGGATTTG
CCGCCTCATC TGGCCAGTCT TGCGCGTCTC GGGCGAGACG TGTCAGGCAA AGAACTGTTG
CCCGGAAATC GCTGCACCCC CCTTTTTGGG GGCACAGAGG CCTACCCGCA AATGCTTCAG
GCGATTTGCG AAGCGAAGCA TTCTATCGCC CTTGCCTCGT ACATTTTCGA GGGCAAGGGG
ATCGGGGCGC TTTTCGTCGA TACCCTCGCG CAAGCGCGGT CGCGCGGAGT GAGCGTCAAG
GTCCTGATCG ATGATGCCTA TGCCAGGTTA TCCAACTCGG ACGCCTACGG AGCATTGCGG
CTTCACGGTA TTGATGTCGC CCTGTTCAAT CCCCCTGTGA TACCGGCACG CCTGCACGGG
TTGCATCTGC GCAACCATCG CAAACTGCTC ATCGTTGACG GGTACCGGGG CTTTACCGGC
GGCATGAACA TCCATAGGCC CTATTGGTGT CCCAAGGCCC CGGAAAGCGC TTTCCGCGAT
CTGCACCTTG AGGTTTCGGG TCCGGTCGTC GGGCAAATGC GGGAAACCTT CGAGCGGGAC
TGGTACGATA GCAAGGAAGA AGAGCTGGAC GAAAGCTTCT GGACTGGCAA ATCGGGCGGT
CCGATCACCG ACGGATTTAG CCTTGCGCGC GGGATCGAAT CCGGACCTGA CGAAACGCTG
GACCGGATGC GGTGGATTTT CATAGGCGCA ATCAATGCCG CTCAGAAAAA GATTTCCATC
CGCACACCTT ATTTCCTGCC TGACCAGCCT ACTATTGCCG CGCTGGGCGC AGCCGCTTTG
CGAGGGGTTC GGGTCGAGAT CGTGGTCCCG CGAAACAGCG ACCATCTGTT CGTGCAATGG
GCATCTAAGG CGCATTACTG GCAGATAATC GAACACGGTG TCTGCATTTA TGAGCGCCCC
GGCCCGTTCG ATCATGGCAA GCTGATGATA ATTGACGATG CCTGGGTGTG TGTCGGCTCC
GCCAACTGGG ATGCGCGTAG CCTGCGCCTG AACTTCGAAT TCAACCTGGA AATTTACGAT
CGCAGGCTGG CGCTGGAGCT TGGTGACGAT TTCGCCCGAA TCAGGTCTGC GTCGAAGAAA
GTGAGGCCGA CCGACCTGTC TGACATGCCG TATTTCGTGA AACTGCGAAA TGGCTTTGCG
CGGCTGTTTT CGCCGATCCT TTGA
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| Protein sequence | MIFSIAVIAA IATASHAIIH KRDPRSATIW LLVVALVPLG GSLCYLLFGI NRVNRKAMRL
RAARPAKSEL SNLGSAGMDL PPHLASLARL GRDVSGKELL PGNRCTPLFG GTEAYPQMLQ
AICEAKHSIA LASYIFEGKG IGALFVDTLA QARSRGVSVK VLIDDAYARL SNSDAYGALR
LHGIDVALFN PPVIPARLHG LHLRNHRKLL IVDGYRGFTG GMNIHRPYWC PKAPESAFRD
LHLEVSGPVV GQMRETFERD WYDSKEEELD ESFWTGKSGG PITDGFSLAR GIESGPDETL
DRMRWIFIGA INAAQKKISI RTPYFLPDQP TIAALGAAAL RGVRVEIVVP RNSDHLFVQW
ASKAHYWQII EHGVCIYERP GPFDHGKLMI IDDAWVCVGS ANWDARSLRL NFEFNLEIYD
RRLALELGDD FARIRSASKK VRPTDLSDMP YFVKLRNGFA RLFSPIL
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