Gene Sala_0383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0383 
Symbol 
ID4081970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp395730 
End bp396230 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content59% 
IMG OID638008742 
Productheat shock protein Hsp20 
Protein accessionYP_615439 
Protein GI103485878 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.170778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTC GCGATCTCAT TCCCTGGAAA AGCCAGGGCC AGGACATCGC TCCCCGGCAG 
GAGGAGCGGG TCGATCATCC GGTGATGTCG CTTCATCGAG ATATCAATCG CTTGTTCGAC
GACATGTTTC GCGGGTTTTC AATGCCCTCG CTGCCGTCCA TCGGGCGCAG CCTTGGCTTG
CCGCGGGTCG AGCTGTCGGA GAACGACAAG GAAATCCGTG TCACGGCCGA GTTGCCGGGC
ATGGAGGAAA AGGACATCGA AATCAGCCTG GACAATCACC AGCTGGTGAT CCGGGGCGAA
AAGAAGTCCG AAACCAGCGA CGAGGAACGC GGCTATTCCG AACGTAGCTA TGGCCGCTTC
GAGCGTCGCA TCGGCCTGCC TTCGCAGATC GATGAGGACA AGGTCGAGGC GGCCTTCCGC
AATGGTGTTC TGACCGTTAC GGTTCCGCGT ACCGCAGAAG CGGCACATGG ACGCAAGACG
ATCCCGATCA ACGCCGGTTA A
 
Protein sequence
MAIRDLIPWK SQGQDIAPRQ EERVDHPVMS LHRDINRLFD DMFRGFSMPS LPSIGRSLGL 
PRVELSENDK EIRVTAELPG MEEKDIEISL DNHQLVIRGE KKSETSDEER GYSERSYGRF
ERRIGLPSQI DEDKVEAAFR NGVLTVTVPR TAEAAHGRKT IPINAG