| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0372 |
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| Symbol | |
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| ID | 4081959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 383285 |
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| End bp | 384829 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638008731 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_615428 |
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| Protein GI | 103485867 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.424462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGA AGGAACAGTC TCTCCGCACG CTACTCGAAC GGCGCGGGGT GCTGCGCGGG
GCAGCCATGC TGGGCGCAGG TGCAACGATG ATGCACCCGC TCCCGGTCCT GGCCGCGAGC
AGCCAGTCGG CCGCGATCCG CAAGGCCGCC GAGGCGGGCA AGGCCGCCTC GATCCAGCGC
ATCCGCGACT GGATTGCCCT CCCCTCGATC GCCGCCGAAA ATCTGAACAT GGCCGAAGGC
GCAGCCTTTA TGGCCGAACT CGCGCGCGAC GCCGGGTTCA CCAATGTGGA GATCGTCCCC
ACCGACGGCC ACCCCGGCGT GTTCGGCACG ATCGACGTCG GCGCCCCCCG CACGCTCGGC
ATCTATTTCA TGTATGACGT CAAACAGTTC GATCCCGCCG AATGGTCGTC GCCGCCGCTC
GAAGGGCGGA TGGTCGAGCG CCCCGGTTTC GGCCGGGCAA TCATGGGCCG CGGCGCGGTG
AACCAGAAGG GGCCGGAAGC CGCCTTCCTC GCCGCGCTCC ACGCGATCCG CGCCGCCAGG
GCGAAGCTGC CGGTCAACAT CGTCCTCGTC TGCGAAGGCG AGGAGGAGAT CGGCTCGCCG
CATTTCCGCC AGATCGCGAC CAAGCCCAAC ATCCTTGCCG CGCTCAGGAA ATGCGAGGGC
ATCTTCATCC CCTTCGCCTC GCAGGGCAAG ACCGGCAATG TCACGGTCAA TCTGGGGTCT
AAAGGCATCA TCGAACTCGA ACTGATCGCC AGCGGCGAGA AATGGGGCCG CGGCCCCAAA
AAAGACGTGC ATTCCAGCCT CAAGGCGATG GTCGACTCGC CCGCGTGGCG GCTGGTGCAG
GCGCTGCAGA CGCTGGTGAC GAAGGATGGC AACACCCCCG CGATCGAAGG CTGGTTCGAA
AATGTCCGCC CGCTTACGGA GCGCGAAAAG GAACTGATCC GCGCGGCCGC CAGGGCAGGC
GACGAAGCCG CGCAGAAACA GGCGCTCGGC ATTACCCACT GGATCGATAA TCTCGCCTAC
GACGACGCGC TGATCCGGCT GGCGCAGGAG CCGACGGTCA ATATCGAGGG GCTGGTTGCG
GGCTATACCG GCCCCGGCGG CAAGACGATC CTGCCCGGCC GCGCGGTCGC CAAGCTCGAC
CTCCGCCTCG TTCCCAACCA GACGCGCGCC GAGGCCGAGA AGAAGCTCCG CGCTCACCTC
GACAAACATG GTTTCACCGA TGTCGAGATG AATGTGTCGG GCGGCTACGA CCCCACCGAG
GTCGCCGAGG ACAGCCGCCT CGTCCGTTCC GAACTCGCGA CCTATAAAAG GCTCGGCGTC
GCGACGAGCC TCAACCCGCG CATGGCGGGC AGCTGGCCGG GCGCGACCTT CACCGCGCCG
CCGGTGTCGA TTCCCGCGGC GCATTTCGGC ATCGGCCACG GATCGGGCGC GCACGCCCCC
GACGAATATT ATCTGATCGA TTCGACCAAC CCCAGGGTCG CAGGCCTGGT CGATGCGACG
ATGGGCTTCG CCGAATTTCT CTACACGCTC GCCGCGATCC GATGA
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| Protein sequence | MDMKEQSLRT LLERRGVLRG AAMLGAGATM MHPLPVLAAS SQSAAIRKAA EAGKAASIQR
IRDWIALPSI AAENLNMAEG AAFMAELARD AGFTNVEIVP TDGHPGVFGT IDVGAPRTLG
IYFMYDVKQF DPAEWSSPPL EGRMVERPGF GRAIMGRGAV NQKGPEAAFL AALHAIRAAR
AKLPVNIVLV CEGEEEIGSP HFRQIATKPN ILAALRKCEG IFIPFASQGK TGNVTVNLGS
KGIIELELIA SGEKWGRGPK KDVHSSLKAM VDSPAWRLVQ ALQTLVTKDG NTPAIEGWFE
NVRPLTEREK ELIRAAARAG DEAAQKQALG ITHWIDNLAY DDALIRLAQE PTVNIEGLVA
GYTGPGGKTI LPGRAVAKLD LRLVPNQTRA EAEKKLRAHL DKHGFTDVEM NVSGGYDPTE
VAEDSRLVRS ELATYKRLGV ATSLNPRMAG SWPGATFTAP PVSIPAAHFG IGHGSGAHAP
DEYYLIDSTN PRVAGLVDAT MGFAEFLYTL AAIR
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