Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0312 |
Symbol | |
ID | 4082876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 316747 |
End bp | 318324 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638008671 |
Product | hypothetical protein |
Protein accession | YP_615368 |
Protein GI | 103485807 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.161115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCTT TCGCACGCAT TCATATGGTC ATGCTCAGCG GCGTGGCCTG TTCCATTCTG GCCGCTTGCG GCGCCGACGG CGTGGCCTCG CCGGGCGAGG GCGTGATCGT CGTCCCCGCG CCGACCCCGA CCCCGACCCC CACGCCCACG CCGACCCCGA CGCCCACCGG CGTCACCCCG GCCGCAAATT GCCCGACGAT CGCCGGCGCC GACCAGCTCA CCGACCTCGG CACGATCACC GGCAACGAAG GCACCTGGCG CAACTGCGGT TTCCCCGCGC GCTTCAATTC GACCACGGCG ATCCCGAAGG TCGCCGGCGT GATTTACTCG CTGCCCGGCC GCGTCGATGT CGGCACCGAC CAGGGTCCGA CCGAGGAAGC GGGCGACCCC GCCGACGTCA CGCTGACGAT TGATCCCGGC GTCACCATCT TTGGCGCGAC GGGCGTGTCC TTCCTCGCCG TCAACCGCGG CAACAAGATC GACGCGGTCG GCACCCCGAC CCAGCCGATC GTCTTCACCG GCCGCGGCAA TGTTGTCGGC AGCGCGACCG ACAACACGTC GCAGCTGTGG GGCGGTGTCG TCCTGCTCGG CCGCGCGCCG ATCACCGACT GCCTTGCCCC CGCCGCGACC CCCGGCACCG CTGCGTGCGA ACGCAACACC GAAGGCGCGA CCAACGCGCT TTATGGCGGC GCCACCGCGA ACGACAATTC GGGTCGCATG TCCTATGTCC AGATCCGCTA TTCGGGCTTT GTCCTGTCGG CGAACAGCGA GCTTCAGGGC CTGACCCCCT CGGGCGTTGG TTCGGGCACC CAGATCGACC ATATCCAGAT TCACAACAGC TCGGACGATG GCGCCGAAGT GTTCGGCGGC CGGGTCAATA TGAAGCATCT CGTCATCACC GGCGCCGAGG ATGACGGTCT CGACACCGAC GTCGGTTATC AGGGCAATAT CCAATATGTC ATCGGCGTCC AGCGCGCCGG CGGCGCGGTC GGCGACTCGA TGATGGAAAT CGACTCGGAC GGCAACGAAG AGGCGATCCC GCGCCAGCGC GTCGCGCTGT CGAACTTCAC CTATATCCAG CGCAACAATG CGGCGGGCAA TGGCGCGGCG ATCCGCATCC GCGGCGGCGC CGACTATATG TTCGCCAACG GCCTGATCGT CGCGCCGGGC ATTCGCTGCC TCCGCATCGA CAGCGTCACG ACCGTTCGCG CTGCCGATCC CGCGCTTGAC GATCAGGGCC CGCCGCGCTT CGAATCGGTG TCGCTCCAGT GCAACGCGAC GCCCTTCCGC GGCTCGAACG GTGTCACCGA TGCCGAGGTG CAGGCGATTT TCGAAGCCGG CACCAACAAC CGGTCGAACT ATGTGCCCAG CCTGACCAAC CTGTTCGTCA ACGGGGCCAC CGAAACCGGC TTCACGCCCT TCGACGCGAA GACGCTGAAC GCCTTCTTCG ACACCACCGC CTATGTCGGC GCCGTCCGCG ACGCCAACGA CAGCTGGTAC CAGGGCTGGA CCTGCAACTC GGCGACGGCG GACTTCGGCA CGTCGAGCGG CAGCTGCACC GGCATCCCGA CGACCTGA
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Protein sequence | MAAFARIHMV MLSGVACSIL AACGADGVAS PGEGVIVVPA PTPTPTPTPT PTPTPTGVTP AANCPTIAGA DQLTDLGTIT GNEGTWRNCG FPARFNSTTA IPKVAGVIYS LPGRVDVGTD QGPTEEAGDP ADVTLTIDPG VTIFGATGVS FLAVNRGNKI DAVGTPTQPI VFTGRGNVVG SATDNTSQLW GGVVLLGRAP ITDCLAPAAT PGTAACERNT EGATNALYGG ATANDNSGRM SYVQIRYSGF VLSANSELQG LTPSGVGSGT QIDHIQIHNS SDDGAEVFGG RVNMKHLVIT GAEDDGLDTD VGYQGNIQYV IGVQRAGGAV GDSMMEIDSD GNEEAIPRQR VALSNFTYIQ RNNAAGNGAA IRIRGGADYM FANGLIVAPG IRCLRIDSVT TVRAADPALD DQGPPRFESV SLQCNATPFR GSNGVTDAEV QAIFEAGTNN RSNYVPSLTN LFVNGATETG FTPFDAKTLN AFFDTTAYVG AVRDANDSWY QGWTCNSATA DFGTSSGSCT GIPTT
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