Gene Sala_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0312 
Symbol 
ID4082876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp316747 
End bp318324 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content67% 
IMG OID638008671 
Producthypothetical protein 
Protein accessionYP_615368 
Protein GI103485807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.161115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCTT TCGCACGCAT TCATATGGTC ATGCTCAGCG GCGTGGCCTG TTCCATTCTG 
GCCGCTTGCG GCGCCGACGG CGTGGCCTCG CCGGGCGAGG GCGTGATCGT CGTCCCCGCG
CCGACCCCGA CCCCGACCCC CACGCCCACG CCGACCCCGA CGCCCACCGG CGTCACCCCG
GCCGCAAATT GCCCGACGAT CGCCGGCGCC GACCAGCTCA CCGACCTCGG CACGATCACC
GGCAACGAAG GCACCTGGCG CAACTGCGGT TTCCCCGCGC GCTTCAATTC GACCACGGCG
ATCCCGAAGG TCGCCGGCGT GATTTACTCG CTGCCCGGCC GCGTCGATGT CGGCACCGAC
CAGGGTCCGA CCGAGGAAGC GGGCGACCCC GCCGACGTCA CGCTGACGAT TGATCCCGGC
GTCACCATCT TTGGCGCGAC GGGCGTGTCC TTCCTCGCCG TCAACCGCGG CAACAAGATC
GACGCGGTCG GCACCCCGAC CCAGCCGATC GTCTTCACCG GCCGCGGCAA TGTTGTCGGC
AGCGCGACCG ACAACACGTC GCAGCTGTGG GGCGGTGTCG TCCTGCTCGG CCGCGCGCCG
ATCACCGACT GCCTTGCCCC CGCCGCGACC CCCGGCACCG CTGCGTGCGA ACGCAACACC
GAAGGCGCGA CCAACGCGCT TTATGGCGGC GCCACCGCGA ACGACAATTC GGGTCGCATG
TCCTATGTCC AGATCCGCTA TTCGGGCTTT GTCCTGTCGG CGAACAGCGA GCTTCAGGGC
CTGACCCCCT CGGGCGTTGG TTCGGGCACC CAGATCGACC ATATCCAGAT TCACAACAGC
TCGGACGATG GCGCCGAAGT GTTCGGCGGC CGGGTCAATA TGAAGCATCT CGTCATCACC
GGCGCCGAGG ATGACGGTCT CGACACCGAC GTCGGTTATC AGGGCAATAT CCAATATGTC
ATCGGCGTCC AGCGCGCCGG CGGCGCGGTC GGCGACTCGA TGATGGAAAT CGACTCGGAC
GGCAACGAAG AGGCGATCCC GCGCCAGCGC GTCGCGCTGT CGAACTTCAC CTATATCCAG
CGCAACAATG CGGCGGGCAA TGGCGCGGCG ATCCGCATCC GCGGCGGCGC CGACTATATG
TTCGCCAACG GCCTGATCGT CGCGCCGGGC ATTCGCTGCC TCCGCATCGA CAGCGTCACG
ACCGTTCGCG CTGCCGATCC CGCGCTTGAC GATCAGGGCC CGCCGCGCTT CGAATCGGTG
TCGCTCCAGT GCAACGCGAC GCCCTTCCGC GGCTCGAACG GTGTCACCGA TGCCGAGGTG
CAGGCGATTT TCGAAGCCGG CACCAACAAC CGGTCGAACT ATGTGCCCAG CCTGACCAAC
CTGTTCGTCA ACGGGGCCAC CGAAACCGGC TTCACGCCCT TCGACGCGAA GACGCTGAAC
GCCTTCTTCG ACACCACCGC CTATGTCGGC GCCGTCCGCG ACGCCAACGA CAGCTGGTAC
CAGGGCTGGA CCTGCAACTC GGCGACGGCG GACTTCGGCA CGTCGAGCGG CAGCTGCACC
GGCATCCCGA CGACCTGA
 
Protein sequence
MAAFARIHMV MLSGVACSIL AACGADGVAS PGEGVIVVPA PTPTPTPTPT PTPTPTGVTP 
AANCPTIAGA DQLTDLGTIT GNEGTWRNCG FPARFNSTTA IPKVAGVIYS LPGRVDVGTD
QGPTEEAGDP ADVTLTIDPG VTIFGATGVS FLAVNRGNKI DAVGTPTQPI VFTGRGNVVG
SATDNTSQLW GGVVLLGRAP ITDCLAPAAT PGTAACERNT EGATNALYGG ATANDNSGRM
SYVQIRYSGF VLSANSELQG LTPSGVGSGT QIDHIQIHNS SDDGAEVFGG RVNMKHLVIT
GAEDDGLDTD VGYQGNIQYV IGVQRAGGAV GDSMMEIDSD GNEEAIPRQR VALSNFTYIQ
RNNAAGNGAA IRIRGGADYM FANGLIVAPG IRCLRIDSVT TVRAADPALD DQGPPRFESV
SLQCNATPFR GSNGVTDAEV QAIFEAGTNN RSNYVPSLTN LFVNGATETG FTPFDAKTLN
AFFDTTAYVG AVRDANDSWY QGWTCNSATA DFGTSSGSCT GIPTT