Gene Sala_0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0237 
Symbol 
ID4083096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp243434 
End bp243946 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content68% 
IMG OID638008596 
ProductOmpA/MotB 
Protein accessionYP_615294 
Protein GI103485733 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.064428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCC CACTCGTCCG ACCGTTATGT ACGCTGTTCC TGACCGCTTT CGCCGCGCTG 
CTGGCGGCGT GCCAGAGCCT GCCCGCCCCC GGCGGATTCT CTCCCGAACA GGTCGCGGTG
CTCAAAAGCG AGGGTTTTGT CGAAACCGCG CTCGGCTGGG AACTCAGCAT GCCCGAACGC
CTGCTGTTCC CCACCAACGA AAGCGCCGTG CCCGCCGAAC AGCAGGAACG GATGCGGGCG
ATCGCGATGC GGCTCGTGTC GGTCGGCATC ACGACCGCGC GGGTCGAAGG CCACACCGAT
TCGACGGGAA GCTCGGCCTA TAATCTGACG CTGTCGCGGG CGCGCGCGGA GGCGGTCGCG
GCTCCGATGC GCGCGGGCGG CATGACGTTC ACCGCCGATC AGATCGTCGG CCGCGGCGAA
ACGCTGCCGC TGTCGGGCAA CGACACGGCC GAAGGGCGGC AGGATAACCG GCGCGTGGTG
GTGATTGTCA CGCCGGCGCT TGCGTCGCAA TAG
 
Protein sequence
MTIPLVRPLC TLFLTAFAAL LAACQSLPAP GGFSPEQVAV LKSEGFVETA LGWELSMPER 
LLFPTNESAV PAEQQERMRA IAMRLVSVGI TTARVEGHTD STGSSAYNLT LSRARAEAVA
APMRAGGMTF TADQIVGRGE TLPLSGNDTA EGRQDNRRVV VIVTPALASQ