Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0237 |
Symbol | |
ID | 4083096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 243434 |
End bp | 243946 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638008596 |
Product | OmpA/MotB |
Protein accession | YP_615294 |
Protein GI | 103485733 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.064428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCC CACTCGTCCG ACCGTTATGT ACGCTGTTCC TGACCGCTTT CGCCGCGCTG CTGGCGGCGT GCCAGAGCCT GCCCGCCCCC GGCGGATTCT CTCCCGAACA GGTCGCGGTG CTCAAAAGCG AGGGTTTTGT CGAAACCGCG CTCGGCTGGG AACTCAGCAT GCCCGAACGC CTGCTGTTCC CCACCAACGA AAGCGCCGTG CCCGCCGAAC AGCAGGAACG GATGCGGGCG ATCGCGATGC GGCTCGTGTC GGTCGGCATC ACGACCGCGC GGGTCGAAGG CCACACCGAT TCGACGGGAA GCTCGGCCTA TAATCTGACG CTGTCGCGGG CGCGCGCGGA GGCGGTCGCG GCTCCGATGC GCGCGGGCGG CATGACGTTC ACCGCCGATC AGATCGTCGG CCGCGGCGAA ACGCTGCCGC TGTCGGGCAA CGACACGGCC GAAGGGCGGC AGGATAACCG GCGCGTGGTG GTGATTGTCA CGCCGGCGCT TGCGTCGCAA TAG
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Protein sequence | MTIPLVRPLC TLFLTAFAAL LAACQSLPAP GGFSPEQVAV LKSEGFVETA LGWELSMPER LLFPTNESAV PAEQQERMRA IAMRLVSVGI TTARVEGHTD STGSSAYNLT LSRARAEAVA APMRAGGMTF TADQIVGRGE TLPLSGNDTA EGRQDNRRVV VIVTPALASQ
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