| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0196 |
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| Symbol | |
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| ID | 4082305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 210709 |
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| End bp | 212157 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638008555 |
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| Product | patatin |
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| Protein accession | YP_615253 |
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| Protein GI | 103485692 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.931024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTTCA CCCCGACGCT CAGCGCCGAC CGCGATCTCG CGACCGCGCC CGACTATGCC
GCCTGGAGCA AGGCGGCGCG CGAGCATGAC AGGAAATCGG GGATGCAGGC GTGGCGCGAT
GCCGACGAGA GCAAGCATTT CGATTATAAG GCCATTCGGG CAAGGCTCGA AAAGCTGCGC
AAGCTGTCGG CGGCGGGCGA CGTCAAGGGG CTGCTCTTCG TGCTCAACGA GGGCATCCAC
GGCAATATCG ACGGCATGGG GCACGAGCGG CTGTATCAGA AGGCGCGTTT CGGGACGAAA
AAGCTCGTCG AAGCCTATAT CGCGGAGGTC GTCGCCTCGC TCGACAAGAT CGCCGCCGCG
CGCAGCATCG GTCGTGAGGA AAAGCGCGAC TTCTTTCGCC GCGCCCAGCA TTGTTACGGC
CGCTCGGCGC TATTGCTGTC GGGATCGGGC AGCTTCCTCT TCTTCCACAT CGGCGTCGTC
AAGGCGCTCT GGTCCGAAGG CGTGCTGCCG TCGATCATGT CGGGCGCGAG TGGCGGGTCG
ATCGTCGCCG CGGTCGTCTG CACGCGCAAG GACGCCGACA TCGGCGCCTT TCTCGAAAGC
GAGCGCCTCG CCAACCCCGA TCGCGCGCCC GACGGACGGC GCCTCGCCTC GGACGCGGTG
CGCGAACGGC TCGCGGGCCT GATCCCCGAC CTGACCTTTC AGGAGGCCTA TGAGATCAGC
GGGCGTCACC TCAACGTCTC GGTCGCGCCC GCCGAAAAGC ATCAGAACGG GCGGCTCCTG
AACGCGATCA CCGCGCCCAA TGTGCTGATC CGCGAGGCCG TGCTCGCGTC ATGTGCGGTC
CCCGGCGTCT TTCCGCCCGT CATGCTGATG GCACGCGACG ACGATGGCGC GCGCATCGCC
TATCAGCCCG ATCGTCGCTG GGTCGACGGG TCGGTGACGC ACGACATCCC GACCAGGCGC
CTCGAACGCC TTTATGGCGT CAACCACCAT ATCGTCAGCC AGGCGAACCC GATCGCGCTG
CCCTTCGCGA CCGACACGCG CAAGCAGATG GCGCCGATCG AGGCGATCCA GCATGCCTCG
ATGACCACCT TCAAGGCGTG GCTCAACGCG AACATGGTGA TTTTCCAGAA ACCGCTCGAG
CTGATTCCGC CCTTGAACAG CCTCGCCAAC ATGGCGCGGT CGGTGATCAA CCAGGAATAT
ACCGGCGACA TCAACATCAT CCGCCCGCCC AAATTCTGGT CGCCCGCGAA GATCCTCTCC
GATCTGGGGC AGGATGATAT CGACGAACTG GTCGACACCG GCATGCGCAC CGCCTGGCCC
AAGATCGAAA TGGTCCGCAC CCAGACCGCG ATCAGCCGCG CGCTCGAAGC GATCCTTGCG
AAGATCGACA AGGCGGGCGA CGACGGCCCC GGCCACCGCA GCGCCGCGCT CAAGAAAGCG
GTGCGGTGA
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| Protein sequence | MLFTPTLSAD RDLATAPDYA AWSKAAREHD RKSGMQAWRD ADESKHFDYK AIRARLEKLR
KLSAAGDVKG LLFVLNEGIH GNIDGMGHER LYQKARFGTK KLVEAYIAEV VASLDKIAAA
RSIGREEKRD FFRRAQHCYG RSALLLSGSG SFLFFHIGVV KALWSEGVLP SIMSGASGGS
IVAAVVCTRK DADIGAFLES ERLANPDRAP DGRRLASDAV RERLAGLIPD LTFQEAYEIS
GRHLNVSVAP AEKHQNGRLL NAITAPNVLI REAVLASCAV PGVFPPVMLM ARDDDGARIA
YQPDRRWVDG SVTHDIPTRR LERLYGVNHH IVSQANPIAL PFATDTRKQM APIEAIQHAS
MTTFKAWLNA NMVIFQKPLE LIPPLNSLAN MARSVINQEY TGDINIIRPP KFWSPAKILS
DLGQDDIDEL VDTGMRTAWP KIEMVRTQTA ISRALEAILA KIDKAGDDGP GHRSAALKKA
VR
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