| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0169 |
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| Symbol | |
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| ID | 4082927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 171643 |
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| End bp | 173307 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638008528 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_615226 |
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| Protein GI | 103485665 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.38937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.394655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGCC GTTTTTCCTG GTCGACCGAA TATCATCACC CCACCGACTG GGACCAGAGC
TTCGCGCCGC TGTCGCTGCC GGACATGTTC GCGGCGAGTG TGGCGCGAAA GGGTGAGGCG
CCGATGCTCG ATTTCATGGG GCGCCAGTTC AGCTACGTCG AGGTCGCGCT TGGCGTGCAG
CGCGTCGCGC GGGGGCTGCA ACTGCTGGGG CTGGGCAAGG GCAGTCGCAT TGGCCTCTTC
CTCCCCAACG TTCCCCATTA TGTCGCGGCC TATTATGGCG CGCTCGCCGC GGGCGCCACG
GTGGTCAATT TCTCCCCGCT CTATACCGTC GCCGAGCTGG AGGCACAGGT CGAGGATTCG
GGCACCGATA CGCTGTTCAC GCTGAGCGCC GCGGCGCTGC TGCCCACCGC GTTCAAGGTG
CTCGACGGAT CGAGTCTCAA CCGGCTGATC GTCGGATCGG TCGCGGGCGG CCTGTCGAAG
ACGAAGTCGC TGCTTTATCG CCTGTTCAAG CGCCGCGAGG TCGCGCCGCT GCCGGGCGAT
CCGCGCGTCA TCCGCTTCTC GGAGCTCACC GACAATGACG GGCGGCCCGA GCCCGTCGCA
ATCGCCCCCG AAACCGACGT CGCGCTGATC CAGTACACCG GCGGCACGAC GGGAACGCCA
AAGGGCGCCA AGCTGACGCA CCAGAATCTC ACCGCCAATG CACGGCAGGT GAATGCGATC
GACCCCGATA CGCAAGCCGA GGACCGCATC CTCGGTGTCC TCCCCTTCTT CCACGTTTTT
GCGAACACCT GCGTGCTCAA TCGCACGGTG CTCAACGGCG GGTCGATCAC GATGCTGCCG
CGCTTCGACG CGAAGCAGGC ACTGGCGGCG ATCGGCCGCA CGAAGACGAC CGCGCTGCCC
GGCGTTCCAA CCATGTATCA GGCGCTGCTT GACCATCCCG ATCTGGCGCG CACCGATTTT
TCCTCGCTGC GCGTGTGCAT TTCGGGCGGC GCGCCGATGC CCGCCGAGCT GCGCGAGAAA
TTCGTCGCAG CGACCGGGGC CTCGCTGGTC GAAGGCTATG GCCTCACCGA AAGTTCGGGG
GTCGTCGCGA CGAACCCCTA TGACGGCCCG GTCCGTCCGG GCACGATCGG CCAGCCTATC
CCGGCGACGC ACATCCGCCT GCTCGACAAG GAAGACCCGT CGAAAGACGC TCCCGACGGC
GAGCCCGGCG AGCTGGCGGT GAAAGGTCCG CAGGTCATGC AGGGCTACTG GAACCGCCCG
GAGGCCGATG CGGAGAGCTT CACCGCTGAC GGCTGGCTGC GCACTGGCGA TGTCGCGGTG
ATCGAGGAGG GCGGCTATAT CCGCATCGTC GACCGGCTGA AGGACATGAT CGCCGTCGGC
GGCTTCAAAG TCTATCCGAG CGTGATCGAG GCGCATCTCC ACGAGCATCC CGCGGTCAAG
GAAGCGATCG TGCTGGGCGT TCCCGACGCC TATCGCGGCG AAGCGCCCAA GGCTTTTGTG
ACGCTGGAAG AGGGCTTCGA GGTTACCGGC GAGGCGCTCG CCGCCTGGCT CAACCCCCAG
CTCGGCAAGC ATGAGCGCGT GATCGCGGTC GAGGTGCGCG AGGCGCTGCC CAAGACGATG
ATCGGCAAGC TCGACCGCAA GGCGCTCAGG GCCGAGGCGG GATAG
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| Protein sequence | MDSRFSWSTE YHHPTDWDQS FAPLSLPDMF AASVARKGEA PMLDFMGRQF SYVEVALGVQ
RVARGLQLLG LGKGSRIGLF LPNVPHYVAA YYGALAAGAT VVNFSPLYTV AELEAQVEDS
GTDTLFTLSA AALLPTAFKV LDGSSLNRLI VGSVAGGLSK TKSLLYRLFK RREVAPLPGD
PRVIRFSELT DNDGRPEPVA IAPETDVALI QYTGGTTGTP KGAKLTHQNL TANARQVNAI
DPDTQAEDRI LGVLPFFHVF ANTCVLNRTV LNGGSITMLP RFDAKQALAA IGRTKTTALP
GVPTMYQALL DHPDLARTDF SSLRVCISGG APMPAELREK FVAATGASLV EGYGLTESSG
VVATNPYDGP VRPGTIGQPI PATHIRLLDK EDPSKDAPDG EPGELAVKGP QVMQGYWNRP
EADAESFTAD GWLRTGDVAV IEEGGYIRIV DRLKDMIAVG GFKVYPSVIE AHLHEHPAVK
EAIVLGVPDA YRGEAPKAFV TLEEGFEVTG EALAAWLNPQ LGKHERVIAV EVREALPKTM
IGKLDRKALR AEAG
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