Gene Sala_0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0165 
Symbol 
ID4082923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp166068 
End bp166712 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content70% 
IMG OID638008524 
Producthypothetical protein 
Protein accessionYP_615222 
Protein GI103485661 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.197287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATCTC CCTACCCCAA AGGCGCCATC CCGCCCCCAA AGACACTGGA CCGCCCTGCC 
CCCGCGCGGC ATGATGGCGC GATGGACACT GCCCCCACCT GGTTCACCGG CCAGCTGCTG
CTCGCGCTGC CCGGCATCGG CGATCCCCGC TTCGAACATT CGGTGATCGC GATGATCAGC
CATGACGAGG ATGGCGCGAT GGGAATCGGC ATCGCCGACC CGATCGAGGG CATGACCGTC
GGCGCGGTGC TCGACCAGCT GGGGATCGAG CATGAGGCCC CGCTCGACCA GCCCGTCTAT
CTGGGCGGCC CGGTCGAACC ATCGCGCGGC TTCGTCCTCC ACAGCCGCGA CTGGGGCGGC
GAGGGCGCGG TGCTGGTGGC CGATCGCTGG ATGGTGTCGA GTTCGCACGA CATATTGCGC
GCGATCGGCG AGGGGCGGGG CCCTTCGCGC TGGCTGGTCG CGCTGGGATA TGCCGGATGG
TCGCCGGGGC AGCTTGAGGG TGAGATGGTG CGCCACGGCT GGCACGTCAC GCCGGGCAGC
GACGCGCTGT TGTTCGACAC GCCGCCCGCC CGGCGGTGGC AGGCGGCGTT TGCCGAAGCG
GGAGTGGACG CCCGCCTGCT GACGACCAAA GGCGGGGAAG CCTGA
 
Protein sequence
MVSPYPKGAI PPPKTLDRPA PARHDGAMDT APTWFTGQLL LALPGIGDPR FEHSVIAMIS 
HDEDGAMGIG IADPIEGMTV GAVLDQLGIE HEAPLDQPVY LGGPVEPSRG FVLHSRDWGG
EGAVLVADRW MVSSSHDILR AIGEGRGPSR WLVALGYAGW SPGQLEGEMV RHGWHVTPGS
DALLFDTPPA RRWQAAFAEA GVDARLLTTK GGEA