Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0165 |
Symbol | |
ID | 4082923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 166068 |
End bp | 166712 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638008524 |
Product | hypothetical protein |
Protein accession | YP_615222 |
Protein GI | 103485661 |
COG category | [K] Transcription |
COG ID | [COG1678] Putative transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.197287 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTATCTC CCTACCCCAA AGGCGCCATC CCGCCCCCAA AGACACTGGA CCGCCCTGCC CCCGCGCGGC ATGATGGCGC GATGGACACT GCCCCCACCT GGTTCACCGG CCAGCTGCTG CTCGCGCTGC CCGGCATCGG CGATCCCCGC TTCGAACATT CGGTGATCGC GATGATCAGC CATGACGAGG ATGGCGCGAT GGGAATCGGC ATCGCCGACC CGATCGAGGG CATGACCGTC GGCGCGGTGC TCGACCAGCT GGGGATCGAG CATGAGGCCC CGCTCGACCA GCCCGTCTAT CTGGGCGGCC CGGTCGAACC ATCGCGCGGC TTCGTCCTCC ACAGCCGCGA CTGGGGCGGC GAGGGCGCGG TGCTGGTGGC CGATCGCTGG ATGGTGTCGA GTTCGCACGA CATATTGCGC GCGATCGGCG AGGGGCGGGG CCCTTCGCGC TGGCTGGTCG CGCTGGGATA TGCCGGATGG TCGCCGGGGC AGCTTGAGGG TGAGATGGTG CGCCACGGCT GGCACGTCAC GCCGGGCAGC GACGCGCTGT TGTTCGACAC GCCGCCCGCC CGGCGGTGGC AGGCGGCGTT TGCCGAAGCG GGAGTGGACG CCCGCCTGCT GACGACCAAA GGCGGGGAAG CCTGA
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Protein sequence | MVSPYPKGAI PPPKTLDRPA PARHDGAMDT APTWFTGQLL LALPGIGDPR FEHSVIAMIS HDEDGAMGIG IADPIEGMTV GAVLDQLGIE HEAPLDQPVY LGGPVEPSRG FVLHSRDWGG EGAVLVADRW MVSSSHDILR AIGEGRGPSR WLVALGYAGW SPGQLEGEMV RHGWHVTPGS DALLFDTPPA RRWQAAFAEA GVDARLLTTK GGEA
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