Gene Sala_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0105 
Symbol 
ID4082100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp104813 
End bp105145 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content60% 
IMG OID638008465 
Producthypothetical protein 
Protein accessionYP_615163 
Protein GI103485602 
COG category[S] Function unknown 
COG ID[COG5470] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.771179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGATGG CCGGCAGATC TCACCTTGCG AAGGATCTTA TGATGGAAGC GTTTGTCGTA 
TTCACGCGGG AAGACACCAC GGATGTGGAT GAACTCGCGG CTTATTCTGC CCGCGTCGGC
CCGTCGTTCG ATGGGCATGA CGTCACTTTT CTCGCCGCTT ATGGCGCGAT GGAGAATTTG
GAGGGGTCGC CGATCGAAGG CGCCGTCATC TTGCGGTTCC CCACGATGCA AGCCGCGCAT
GACTGGTATC ATAGCCCCGC CTACCAAGCT GTTGCTGCGC ATCGCTTCGC CGGTGCCCGC
TACCGCGGGT TTATCGTCGA GGGGCTGCGT TGA
 
Protein sequence
MAMAGRSHLA KDLMMEAFVV FTREDTTDVD ELAAYSARVG PSFDGHDVTF LAAYGAMENL 
EGSPIEGAVI LRFPTMQAAH DWYHSPAYQA VAAHRFAGAR YRGFIVEGLR