Gene Sala_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0091 
Symbol 
ID4082066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp94707 
End bp95270 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content63% 
IMG OID638008452 
ProductTetR family transcriptional regulator 
Protein accessionYP_615150 
Protein GI103485589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0611138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCTG ACGTAACGAA TGCACTGACG CGCAGCTTCT TCGAAGAATG GGCAAGGACT 
GGCTATGCGG GTCTGAGCCT CGAACGGGTG GCGCGAACTG CAGGGGTCGG CAAGGCTGCG
CTTTACCGCC GCTGGCCGGA CAAGGTGTCG ATGGCCAGCG ATTTGCTGTC GCATGTCGGG
TTGACGATGA CCGATGTGGA AGAGCACGGC TCGCTGGAGG CTGATCTGCA AGCGGTGCTC
CTCGCCATCC GCCGCGTTCT GAGGCATCCC AAGGTGCGAC GGATTCTGAC CGACCTTCAT
GGCGAGATCG AGCGGACGCC GGCATTGGAA ATGGCGATCC GGCCTTTCCA GCGCGCACGG
CGCGAGCGGA TCAATGGCCT GATTAATCGG GCGATCAAAC GCCGGGAAGT GTCGCCCTTG
GTGGACCGTG AGATGGCGGC CGACCTCATC GCAGCCCCGT TATACTGGCG GATCGCGGTA
TTGGGGGGAC GATCGGATCG CGCCTACATC AAGCGGCTTG CCCTCGTCAC GGGCGCCGCG
CTTCGCGCAA GCGCGCCTTC GTAA
 
Protein sequence
MRADVTNALT RSFFEEWART GYAGLSLERV ARTAGVGKAA LYRRWPDKVS MASDLLSHVG 
LTMTDVEEHG SLEADLQAVL LAIRRVLRHP KVRRILTDLH GEIERTPALE MAIRPFQRAR
RERINGLINR AIKRREVSPL VDREMAADLI AAPLYWRIAV LGGRSDRAYI KRLALVTGAA
LRASAPS