Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0091 |
Symbol | |
ID | 4082066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 94707 |
End bp | 95270 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638008452 |
Product | TetR family transcriptional regulator |
Protein accession | YP_615150 |
Protein GI | 103485589 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0611138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCTG ACGTAACGAA TGCACTGACG CGCAGCTTCT TCGAAGAATG GGCAAGGACT GGCTATGCGG GTCTGAGCCT CGAACGGGTG GCGCGAACTG CAGGGGTCGG CAAGGCTGCG CTTTACCGCC GCTGGCCGGA CAAGGTGTCG ATGGCCAGCG ATTTGCTGTC GCATGTCGGG TTGACGATGA CCGATGTGGA AGAGCACGGC TCGCTGGAGG CTGATCTGCA AGCGGTGCTC CTCGCCATCC GCCGCGTTCT GAGGCATCCC AAGGTGCGAC GGATTCTGAC CGACCTTCAT GGCGAGATCG AGCGGACGCC GGCATTGGAA ATGGCGATCC GGCCTTTCCA GCGCGCACGG CGCGAGCGGA TCAATGGCCT GATTAATCGG GCGATCAAAC GCCGGGAAGT GTCGCCCTTG GTGGACCGTG AGATGGCGGC CGACCTCATC GCAGCCCCGT TATACTGGCG GATCGCGGTA TTGGGGGGAC GATCGGATCG CGCCTACATC AAGCGGCTTG CCCTCGTCAC GGGCGCCGCG CTTCGCGCAA GCGCGCCTTC GTAA
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Protein sequence | MRADVTNALT RSFFEEWART GYAGLSLERV ARTAGVGKAA LYRRWPDKVS MASDLLSHVG LTMTDVEEHG SLEADLQAVL LAIRRVLRHP KVRRILTDLH GEIERTPALE MAIRPFQRAR RERINGLINR AIKRREVSPL VDREMAADLI AAPLYWRIAV LGGRSDRAYI KRLALVTGAA LRASAPS
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