Gene Sala_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0049 
Symbol 
ID4081543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp51177 
End bp54644 
Gene Length3468 bp 
Protein Length1155 aa 
Translation table11 
GC content64% 
IMG OID638008410 
Producthypothetical protein 
Protein accessionYP_615108 
Protein GI103485547 
COG category[S] Function unknown 
COG ID[COG4717] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTCC AGCTGCTCGA TCTGGTCCGC TATGGCGGTT TTGCGGATCG CGTCGTCACG 
TTCGGGCCGG GGCGGCCGGA TCTTCATCTC GTCATGGGGC CCAACGAGGC CGGCAAGTCG
ACCATGCTAG AGGCAATTGG CGATCTGCTG TTCGGAATTC ATGCGCAAAC GGCGCAAGGC
TGGCGCTTTG ACTATGGAGA GCTTCGCATT CGCGCGGTTC TGGAGCATCA AGGCAGTGTG
GTAGAGATCA CTCGCCGCAA GGGTAGCCGC AACACCCTGC TTGCCACCGA CGGAACTGCG
CTCCCCGAGG ACATCCTGGT TCCTTTTCTC GGCGGGATAG ACCGGACGAC TTTCGAGCGA
ATGTACGGTC TCGATCACCA GAAACTCCGG TCCGGCGGCC TTGCGATTCT GGAGGGCAAA
GACGACGCTG CGCGCCTTGT TCTCGAGGCC GGCAGCGGGC TGAGTGTTGT CGGTGCGGAG
TTGGCCCGCC TCGAACGGGT TGCGGGCGAA CTCTTCAAGC CCAACGCCCA GATTCCACCC
GTCAACCGGC TGATGCGAGA GCGGGGCGAA GCCCAGGCGA TTGTCCGTTC GTCGGCGCTG
ACGGACAGCG CGTGGAGTGC GATTATCGCC GCCGAGCGAC GAGCTGGTGA ACAACGATCC
GAATTGCAGG TTGAAAGTCG CGAGCTTGCG ACACGGGCCG CTGCACTAGA AAGGACCAAT
CGGGCGCGGG CGCCTTTGGC GCGCATTGGC GAAATCGACG CCGAACTCGA GGCGTTGGGC
GACATCAAGC TATTTCCCGC CGATGCCGCA TCCCGGCTCA ATGCAGCCAT CGCAAATCGC
AATACGGCGC AGGAACTCCA GAATCAGCAT AGCATCCAGT TGGACAGGGC AAAGAATGTC
TTGTCGTCAA TCACACTTCC CGAGCTGCTG CTTGCTGAAC GGGAGCGGGC CGAAGCACTT
GAGGAACGAC GGCCTGTGGT CGAAAAGGCA GTGGCGGATA TCGCGCGCCG AACCGGCGAG
CTTGAGCGGT CCGAGGCGCG TATCGAAACC GCCCGCTCCG AGGCGCGCTT ACCGGCTGGT
GCCGCTTTGC CATCGGCGGG ATGGCGCAAG CGCGCACGCG AGTATCTGCA AGACCGACGC
GCGCTGGCGG AGCGGCGCGT CCGCCTGAGC TTGGCCCTGA GTGAAGCGGC ACTGGCCAAA
GCCAAGGCGG AAACCGACCT AGCAGCATTG CCGCCCCCCA TCGAGCTGGC CGGGCTGACG
GATGCAATTA CTGCGGTCCC CGCTGACTTC GCGGAGCGGG TGACGAGTGC AGAAGAACGG
TTGATCCGGG CAGAGCGCCG AATGCAGATC GAGCGCGCCA GTCTTTCCCC TTGGGCGGGA
GAAATTGACG GGCTCGGAAC GATGTCCTTG CCCGTGGATG TTGTAGTTAG CGAACATCAG
GCCCGGATTG AAGTTGCCAA CGCGCAACTG GCCCAGGCCA AGTTGGCCAT TTCCAACTCG
AGCGAAGCCA GCGTCAAAGC GACGGCGCGC CTTGCCGGCT TGTCGGCTGC GGGGGATCTC
CCAACACCAG AAGCCGTTCT CGCGGCGCGC GAGCTACGCG ACAGTGCCGT AGAGGATGTC
CGGGGACGCC TCGCCCGGCC GCGCGAGCCC GGTGACGAGG ATGCCGGAGT CGCGCTGTCT
CTCGCAGTCG AGCGCGCGGA CGCAGTCGCC GATCGGCGCG ACGCGGAAGC AGATCGTATC
GCTGAACTTC TGCTTGCCCG CACCACTTCG GCCGAAGCCG ACGCGTTTCA CCAAGCCAAT
CGGCTCCTCG TCGAAGAGGC CGAAGCGGCC TTAGAGGAGG CTAAAGCAGA TTGGGCGAGC
CTGCTGGCAC CGCTCGGCCT CGTGCTCCCG CCGGCGGCGC TCGCGGCGTG GCGAGCGAGC
CGTGAGCGCG TGCTCGAGGC CTTTGAGGAA CAGGCCGCCG CAAAGACTGG CCTCGACCGG
CTCAAAGCAA CTGCGGCCGC GGCGCTGACT AAATTAGCGC AGATCTCGTC CGCGGCAGGA
TTTCAAATCG AGGCAGAGAT GGAGTTGGCG GACGCCGTGC GTGCCGCCAA AGCGCGTCTA
TCGGCGCTGG AGGTGGCGGA CAGGCTGCGT GCGGCCGCCA ATGTTGTGAT GGCGGGTGTA
GCAACAACGC TTGACGAGCT GGCGCGGGAG GAGCGCGAGA TTGTTTCGCG CGGTGCCGTC
CTCGACGAGG ACCGTGGCGC TTTGATGGTC GAAGCCGGAT TGCTCGAGGA CGCCGGCGAC
CCCGCGATTT CCGATGCAAT CGAAGCGACC GAAGCCGTCG CTGCCGAAAT CGCCACGGCG
GACGGGCTGC GGCGCCAGAT CAACGGAATG AAAAAGGATA TCGACGCGTT CGAGGCGGAT
GCCAACACTC TTTTTGCCGC GGTTGGACAT GACGCGCCTA CCCGCCATTC GGAGGACGTG
CACGCGCTGA CACTGACGCT AAAGGCCGGG CTTGCCGAAA AACTAAAGGT TGAGCGAGCC
CGCGAGGATA TTATCGCGGC ACAGGCCGGA ATTCAGGAAT CCGAGGCGCG CGCGGCCGCG
GCAAACGCGG TCGTCGCAGA GCTGCTCGGC ATAGGCGATA TCACCGAGGA GGCGGCATTG
CTGCCAGCCA TCGCGACGAG CACGCATTCG ATTGCGCTGG GCACTGCGCG GCAAACCGCG
TTGAACGATC TTGTAGAGAT TAGCGGCGGC AGGAGCGTCG AGGAGTTGAC TGCCGACGTC
GCCGTGATCG GTGCGGACGA AGCAACTGCC GAGCTGGAGG CGATTGCGGA CCGGCAGCAT
GAAATAGGGG CCGAGCGCGA GGCAATCGGG AAGGTGCTTC GCGAATCCGA ACTTGCGCAC
GACAATGCAG CAACCGAAAC CTTGGCAGCG GATGCGCAGC AGCGCGTAAA GGAAATTGAA
GCGGCGCTGC TCGACGCGGC CGAGCGCCAC GTCGGCGCCG CCGCGACAGC CGCCATGCTG
CGCTGGCTGA TCGGCAAGCA TCGAGCGGAA AGCCAGGGGC CACTGATCGC TCGCGCAGGG
TCGTTGTTTC AGGAGATGAC CCATGGATCT TTCGCTGGGC TCGGCCTTGA CTATGGTGCA
GACGATCAGC CCAGAATGGT TGGCCTGCGG CAGGGCGGGG AGCGCGTTGG GGTCGATGGG
ATGTCCGAAG GAACGCGGGA TCAGCTCTAT CTGGCGCTGC GCCTGGCTTC AATCGACGAG
CGCGCGGCAG GGGGAATGCC CTTCATCTGC GACGACATCC TGATAACTGC CGACGAGCCG
AGGTCGGCGT CCATGTTGAG CGCATTGGGA GCGATTTCGA GACGGACTCA GGTCATTGTC
TTCACGCACC ACGAACATAT CGTCGATTTG GCGCGGAGGA CACTCGGCGA CGATGGCTTC
ACGTTGCATC GGCTTGACGC TGAAATAGCC GTCATCGCAG CTGCGTAA
 
Protein sequence
MRFQLLDLVR YGGFADRVVT FGPGRPDLHL VMGPNEAGKS TMLEAIGDLL FGIHAQTAQG 
WRFDYGELRI RAVLEHQGSV VEITRRKGSR NTLLATDGTA LPEDILVPFL GGIDRTTFER
MYGLDHQKLR SGGLAILEGK DDAARLVLEA GSGLSVVGAE LARLERVAGE LFKPNAQIPP
VNRLMRERGE AQAIVRSSAL TDSAWSAIIA AERRAGEQRS ELQVESRELA TRAAALERTN
RARAPLARIG EIDAELEALG DIKLFPADAA SRLNAAIANR NTAQELQNQH SIQLDRAKNV
LSSITLPELL LAERERAEAL EERRPVVEKA VADIARRTGE LERSEARIET ARSEARLPAG
AALPSAGWRK RAREYLQDRR ALAERRVRLS LALSEAALAK AKAETDLAAL PPPIELAGLT
DAITAVPADF AERVTSAEER LIRAERRMQI ERASLSPWAG EIDGLGTMSL PVDVVVSEHQ
ARIEVANAQL AQAKLAISNS SEASVKATAR LAGLSAAGDL PTPEAVLAAR ELRDSAVEDV
RGRLARPREP GDEDAGVALS LAVERADAVA DRRDAEADRI AELLLARTTS AEADAFHQAN
RLLVEEAEAA LEEAKADWAS LLAPLGLVLP PAALAAWRAS RERVLEAFEE QAAAKTGLDR
LKATAAAALT KLAQISSAAG FQIEAEMELA DAVRAAKARL SALEVADRLR AAANVVMAGV
ATTLDELARE EREIVSRGAV LDEDRGALMV EAGLLEDAGD PAISDAIEAT EAVAAEIATA
DGLRRQINGM KKDIDAFEAD ANTLFAAVGH DAPTRHSEDV HALTLTLKAG LAEKLKVERA
REDIIAAQAG IQESEARAAA ANAVVAELLG IGDITEEAAL LPAIATSTHS IALGTARQTA
LNDLVEISGG RSVEELTADV AVIGADEATA ELEAIADRQH EIGAEREAIG KVLRESELAH
DNAATETLAA DAQQRVKEIE AALLDAAERH VGAAATAAML RWLIGKHRAE SQGPLIARAG
SLFQEMTHGS FAGLGLDYGA DDQPRMVGLR QGGERVGVDG MSEGTRDQLY LALRLASIDE
RAAGGMPFIC DDILITADEP RSASMLSALG AISRRTQVIV FTHHEHIVDL ARRTLGDDGF
TLHRLDAEIA VIAAA