Gene Sala_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0040 
Symbol 
ID4082227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp40437 
End bp40757 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content67% 
IMG OID638008400 
Producthypothetical protein 
Protein accessionYP_615099 
Protein GI103485538 
COG category[S] Function unknown 
COG ID[COG2960] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.180106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.479768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGCG AAAACCGCTT TTTCGACGAC CTCGCCAAGA TGGTGAACGG CATTGCCGGG 
ACGGTGGCGG GCGCCGGACG CGAAGCCGAA GCCGCGATGC GCGAGCGCGC GAAGGAGTTT
GTCGGTCGCA TGGATTTCGT CAGCCGCGAG GAGTTCGAGG CGGTGAAGCA GATGGCGGCC
ACCGCGCGCG CCGAAGCCGA AGCGCTGAAA GCGCGGCTCG ACAAGCTGGA GGGCGCGGCG
AAGGCTGCTG CCAAGCCTGC CGCTGCGACC AAGTCCGCGA CGAAGCCTGC CGCGAAGCCG
AAAGCAGCAC CCAAGGCGTA A
 
Protein sequence
MQSENRFFDD LAKMVNGIAG TVAGAGREAE AAMRERAKEF VGRMDFVSRE EFEAVKQMAA 
TARAEAEALK ARLDKLEGAA KAAAKPAAAT KSATKPAAKP KAAPKA