Gene TM1040_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3017 
Symbol 
ID4076590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp3185138 
End bp3185458 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content57% 
IMG OID638008346 
Producthypothetical protein 
Protein accessionYP_615011 
Protein GI99082857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.376227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCAGT TCATTTTTGC ATATCACGGT GGCAAAGCCG CCGAGACCCC GGAAGAAGAA 
GAAAAAGAAA TGGCCGCCTG GATGGCCTGG TTTCAGGAGA TGGGAGACGC CGTAGCCATC
CCCGGAAACC CGGTTGGAAA GTCGAAAACG GTCAGCGCCG CTGCCATCAC AGATGATGGC
GGCTCAAACC CCATCTCGGG CTATACAGTG GTCACTGCGG ACACCATCGA AGAGGCTTGC
GAGATGGCCA AAGGGTGCCC CAGCGTGACT GATGGCACCG GCACGATCGA AGTGGCCGAA
ATCATCGAAA TGGTGATGTA G
 
Protein sequence
MPQFIFAYHG GKAAETPEEE EKEMAAWMAW FQEMGDAVAI PGNPVGKSKT VSAAAITDDG 
GSNPISGYTV VTADTIEEAC EMAKGCPSVT DGTGTIEVAE IIEMVM