| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2993 |
|---|
| Symbol | |
|---|
| ID | 4078023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 3159600 |
|---|
| End bp | 3160313 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638008322 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_614987 |
|---|
| Protein GI | 99082833 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.460731 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACCC TTATGACCCA TGGCGGCGGT GACGGATTTT ACAGCTACAG CATGTTTTGC
ACCAAGGCGG CGCTGTTGCT GCAGATGTCA GGTGCGACCT GGCAACGGCA GGATGTTTTT
GATCCGGCGG AGCTCGACGC GATGCCGCAC CAAAAGCTTC CGGTGGTGCG GGACGAGACT
GACGCCTTGA TCCCCGACAG CGAAGGCATC CGCCGTTTTC TCGAAGCCAA AGGCGCGAAC
TTCGACCAAG GTCTTAGCGC CGCTCAAAAG GGCCAGTCCC GCGCGCTCAT CCGCATGATC
GACGAATCGC TCTGGACACA GTTGATGTGC GCGCGCTGGC TCGAAGACGA AGGCTGGGCC
GGGATGCTGC AGTCAGTGTT TGCAGGGGTG CCCGAAGAGC CGCTGAACCT CTTTCGCGAG
AAGGTGGTTG AAGGGCTTCA TTTCACTGGG CACTCGCGTT TTGATCGTGC GGAACGCCTG
CAGCGTCTGG AGCAGGATCT TTGCGCGCTC GAAGATTTTC TTGGCGATCA GCACTTCTTG
TTCGGTGATC ATATGACGGC AGCGGATTGT TCTGCGGCAC CGATGCTCGA GGCGCTGTCC
CGCGCTCCCG CCGCGCCGCA GGTGGTTGAG GTCACGCGAC GCCACGGAAA GCTCCTGGCC
TATGTCACAC GCGTGCTGGA TCGTGGCGCG CTCGAATTGC CCCAAGCTGC ATAA
|
|---|
| Protein sequence | MLTLMTHGGG DGFYSYSMFC TKAALLLQMS GATWQRQDVF DPAELDAMPH QKLPVVRDET
DALIPDSEGI RRFLEAKGAN FDQGLSAAQK GQSRALIRMI DESLWTQLMC ARWLEDEGWA
GMLQSVFAGV PEEPLNLFRE KVVEGLHFTG HSRFDRAERL QRLEQDLCAL EDFLGDQHFL
FGDHMTAADC SAAPMLEALS RAPAAPQVVE VTRRHGKLLA YVTRVLDRGA LELPQAA
|
|---|
| |