| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2992 |
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| Symbol | |
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| ID | 4078022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3158821 |
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| End bp | 3159579 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638008321 |
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| Product | helix-turn-helix, type 11 |
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| Protein accession | YP_614986 |
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| Protein GI | 99082832 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.684158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGAC CGTGCTACAA GGCGCTATTG ACAGTTTTTG TCATTAGCGG ACTCCACACT
AGACAGATGA CAAAAACCGA ACGGCTCTTT CGATTGATGC AAACCCTGCG CCAGCTGCCA
CCCCCCGTGA CAGCAGAGCA GCTTGCTCAG GACCTCGGTG TCTCAGCCAG AACCATTCAC
CGAGACATCG ATGCGCTTCG GGCTCTTGGG GCTGTAATTG ATGGCGCGGC CGGATTTGGC
TTCACCTTGA TCGAGGATGC GACGCTACCC CCACTGGGCT TTGGGGCAAC CGAACTCGAA
GCGCTGGTGC TGGGCCTTTG CGAGGTCCAA CAAAAGGGCG ACCCTGATCT TGCCGAGGCA
GCCCGCACCG CCCTTCGCAA GCTGCGCGCC CGCCTGCCGC AAAGTCAGGC AAAACGGCTG
CAGCACGCAG TATTGTCTGC CCATAGTTTT GCCCCCCCGC TCACTCCAAC TGTCGATGCA
GCTGAGCTAC GGCAAGCCAC CTGGGACGAG CGGGAAGTGG GTTTTGACTA TGTGGACGTC
AAAGGTGCAG TCACACAACG GCATGTCAAA CCGCTGGGGC TGGTCTATTT CGACAAGTCC
TCAGTGCTGG TGGCCTGGTG CCGACTCAGA CAAGACTTCA GGGTCTTCAG ACTTGATCGG
ATGACGTCAC TCGAGGTCAC GCAGATCTCT TTTCGTCCCC ATCGTGTTCG GCTGTACCGT
GAGGCACTTG ATCATCTGCG CAATCAGTCC CTCGGTTGA
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| Protein sequence | MMRPCYKALL TVFVISGLHT RQMTKTERLF RLMQTLRQLP PPVTAEQLAQ DLGVSARTIH
RDIDALRALG AVIDGAAGFG FTLIEDATLP PLGFGATELE ALVLGLCEVQ QKGDPDLAEA
ARTALRKLRA RLPQSQAKRL QHAVLSAHSF APPLTPTVDA AELRQATWDE REVGFDYVDV
KGAVTQRHVK PLGLVYFDKS SVLVAWCRLR QDFRVFRLDR MTSLEVTQIS FRPHRVRLYR
EALDHLRNQS LG
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