| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2978 |
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| Symbol | flgD |
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| ID | 4078008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3142545 |
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| End bp | 3143240 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638008307 |
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| Product | flagellar basal body rod modification protein |
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| Protein accession | YP_614972 |
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| Protein GI | 99082818 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1843] Flagellar hook capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.150885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.50677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCACAG CAGTAACGGG TGTTGGCACC CAGCAAACAA CGACAGCTGG TGGGACGGCT
GGGACGCAGT CGGCGACAAG CGCGCTCACC TCGGATTTTG AAACTTTCCT GAGGCTGATG
ACCACGCAGG CAAAATACCA GGACCCGCTC GAGCCGATGG ATTCGTCAGA TTATACCGCG
CAGCTAGCGC AGTTCTCCTC TGTCGAGCAG CAGGTTCTGA CCAATGAAAC CCTGACAAGC
ATGCTCACCG CGCTTTCTCT TTCCAACATG TCTCAGCTGA CCGGCTGGGT TGGAAGAGAG
GTGCGGGCGC AAGCAGCCGG CTATTTTGAT GGTAGCTCTT CGGTTTCGAT TGCACCGAAT
CCTGCTGCTG TCGCGGATAA GGTCGAGATG ATCATCTATG ACGACCAGGA AGCAGAAGTC
GGCCGCGTGG ATCTGCCGGT CTCTGCCGAG CCTTATCAGT GGAATGGCGA AGACGGTGAT
GGCAACACCT TGCCTGAGGG CTCCTACAGC TTTGTGATCG AAAGCTCCTC CAATGGTGAG
GTGATCCTTT CCGAATTGGC CGAGGTGTAC GGACGCGTGG AAGAGACCCA GAATGTCGAC
GGTGAAGTGG CCTTGATCCT TGAGAGCGGA AGCGCAATCC TCGCGACCTC GGTGACGGCG
CTGCGTGATC CAACCAGTTC CTCTGGCAAT TCCTGA
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| Protein sequence | MTTAVTGVGT QQTTTAGGTA GTQSATSALT SDFETFLRLM TTQAKYQDPL EPMDSSDYTA
QLAQFSSVEQ QVLTNETLTS MLTALSLSNM SQLTGWVGRE VRAQAAGYFD GSSSVSIAPN
PAAVADKVEM IIYDDQEAEV GRVDLPVSAE PYQWNGEDGD GNTLPEGSYS FVIESSSNGE
VILSELAEVY GRVEETQNVD GEVALILESG SAILATSVTA LRDPTSSSGN S
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