| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2962 |
|---|
| Symbol | |
|---|
| ID | 4077113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 3130741 |
|---|
| End bp | 3131019 |
|---|
| Gene Length | 279 bp |
|---|
| Protein Length | 92 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638008291 |
|---|
| Product | export protein FliQ |
|---|
| Protein accession | YP_614956 |
|---|
| Protein GI | 99082802 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1987] Flagellar biosynthesis pathway, component FliQ |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.237465 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAACCG AAGGCATTTT CTACGATACT CTGCGCCAGG GAATTTTGGC GGCGATCACT
ATGTCGCTGC CCATTCTCAT CGCAGCTCTG GTGATCGGTC TTACGGTCGG CCTGTTTCAG
GCGCTGACAT CCATCCAGGA AATGTCGCTG ACATTTGTTC CTAAGCTTGC GGGGATTCTT
GTCGTTTTCT GGCTGACGAT GGCCACGATG ACTCAGACGC TCGTCGCCTT CTTTACCGGT
CACGTAATTC CCCTGATTCA GGGAACTGGA GGACTGTAA
|
|---|
| Protein sequence | MLTEGIFYDT LRQGILAAIT MSLPILIAAL VIGLTVGLFQ ALTSIQEMSL TFVPKLAGIL
VVFWLTMATM TQTLVAFFTG HVIPLIQGTG GL
|
|---|
| |